Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00788 ATGACAACAGCAAGAGGGACCATTGGATACATGGCTCCGGAATTGTTTTATACAAATATAGGAAGAATATCAGATAAGTATGATGTTTATAGTTTTGGAATGCTTCTCATAGAGATAGCAGGCAAGAGAAAAGACTTAAACCCTCATGCAGAGCGATCAAGCCAACTTTACTTTCCCTTTTGGATTTATGATCAACTTGACAAAGAGAAAGATATAAAAATGGAAGATGTTGCAGAGGATGAGAAGAAAATTGCAAAAAAGATGATCATAGTTTCACTTTGGTGTATACAATTAAAACCAATTGATCGTCCTACCATTAATAAGGTAGTCGAAATGCTTGAAGGAGACATTAAGAACCTTAAAATGCCTCCAAAGCCTTCTCTAGTATGTATGGTGAGGGTTAGTGGCAGAATTCGTATCATTGGTGGTCATCTTTTTCTATGCTAG 447 0.3624 MTTARGTIGYMAPELFYTNIGRISDKYDVYSFGMLLIEIAGKRKDLNPHAERSSQLYFPFWIYDQLDKEKDIKMEDVAEDEKKIAKKMIIVSLWCIQLKPIDRPTINKVVEMLEGDIKNLKMPPKPSLVCMVRVSGRIRIIGGHLFLC 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00788 148 ProSiteProfiles Protein kinase domain profile. 1 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00788 148 SUPERFAMILY Protein kinase-like (PK-like) 1 114 IPR011009 -
Phco2g00788 148 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 127 IPR045874 GO:0004672
Phco2g00788 148 Gene3D Transferase(Phosphotransferase) domain 1 1 133 - -
Phco2g00788 148 Pfam Protein kinase domain 2 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00788 Phco-Chr2 8702563 8703738 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco2g00788 Pkinase 1.7e-08 CL0016