Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00786 ATGGCAAGTATGTTTCTCCTCCAACATGATTCTGCATTGATGACGCTATTGCTGTTGCTACTGCTAATGCTTCTTCTTATCAGAACTGGCAGCAGCGCTCATAACGAGTGCGATGAGGATTTCTCTTGTGGGCCGAACCAACCCCCTATCAGATTTCCCTTCCAACTCATCAAGGAGATGGACGAGCCATGCGGTTATCCCCGTATTTGTCTTTCTTGCACTGAAAAATATGAGACCATGCTTCCTACTATGAAACTCCTAGTCACTTACATAGACTACCCAAGTCAGGAAATTGGCTTAACGGACCCCGAAAACTGCTTTTCCAACAAGTTTAACCAAACCATCAATTTTATTCTAACTTACAAATTTAAATCAGCACATGATGGACCACACAATAACTTGAGCTTCTTCAACTGCACTTCAGCTGAGCATCCACACCTCAGAAACCTCTACGAGGATGGCTCAGATTCACAAGACATGGTCTCCTGTCCGATTTACATTTCTGATTCTTTTGAAAGTGTCCTCCAATTGGATCTAACATCCTGTACCAAGATGTTCGACCTCACTGCGCCAATCCCATCCATCCACTCGAATAACTTGTATTTGAGATGGTCCAAACCAAATTGTGCTGAGTGCAAAGGAAAAGGCAAGAGATGTACATGGACGACCAACAACAGCACAGGAGACATCGATTGTTTTGAATGCAATCCGAAGAGAATTCACGTTCCTAAATCTTTTATTTTTGCTTCTACAGCCTATGAATTGAAACAACCAATGTTTAAAAGACTGAAACAAGGGCTGCTGGTCATTTCTGTCTTCAAGAGCATCCTCTATTTTAGGAAAAAGCAAGAAGACCAAGAAAGAGTGGACAAGTTTTTAGAGGACTACAGGGCAGAAAAGCCTGCAAGATTCACCTACGCTGACCTGAAAAGAATCACCAATGGCTTCAAGGAAAAGCTAGGAGAAGGAGCTCATGGGGCTGTGTTCAGAGGAAAACTTTCGAGTGAGATTCCGGTGGCTGTGAAGATCCTCAACAGTACAGAGGGAGAGGGGAATGAGTTCATCAATGAAGTGGGAATTATGGGCAAAATCCATCACATCAACGTGGTCCGTTTGCTTGGCTTCTGTGCAGATGGACTCCATCGTGCTCTTGTCTACAATTTCTTTTCAAACGGTTCCTTACAAAGCTTCATATTTCCACCAGAAGACAAGGACCATTTCCTTGGATGGGAGAAGCTTCAACACGTTGCTCTTGGTATAGCTAAAGGGATTGAGTATCTTCATCAAGGTTGCAATCAGCCCATTATTCACTTTGACATAAATCCTCACAACGTGTTACTTGATCACAACTTCACTCCAAAAATATCTGATTTTGGCTTAGCCAAATTGTGTTCCAAGAATCCCAGTTTGGTGTCCATGACAGCTGCTAGAGGAACTTTGGGATACATTGCACCTGAAGTCTTCTCCAGAAACTTTGGGAACGTGTCTTACAAGTCCGATATTTACAGTTATGGAATGTTGTTGTTAGAAATGGTTGGTGGGAGAAAGAATCTGGACATGTCTTCTCCACAAAATTTCCATGTTCTATACCCCGATTGGATCCATAACCTGGTTGATGGAGATGTACATATCCATGTTGAGGATGAAGGTGATGTTAAGATTGCAAAGAAACTAGCAATTATTGGGCTTTGGTGCATTCAGTGGGAGCCAGTGAACCGTCCATCCATAAAATCTGTGATACATATGCTAGAAACTGAAGAGGAAAACCAGTTTGTTGTGCCTCCTAATCCATTTCAGTCAACAACTTCCACTACAGTTAAGGGACTCAGTCCTACTAGACGACCTTTGCAGTTGGAAGTGATTCAAGAATGA 1872 0.4252 MASMFLLQHDSALMTLLLLLLLMLLLIRTGSSAHNECDEDFSCGPNQPPIRFPFQLIKEMDEPCGYPRICLSCTEKYETMLPTMKLLVTYIDYPSQEIGLTDPENCFSNKFNQTINFILTYKFKSAHDGPHNNLSFFNCTSAEHPHLRNLYEDGSDSQDMVSCPIYISDSFESVLQLDLTSCTKMFDLTAPIPSIHSNNLYLRWSKPNCAECKGKGKRCTWTTNNSTGDIDCFECNPKRIHVPKSFIFASTAYELKQPMFKRLKQGLLVISVFKSILYFRKKQEDQERVDKFLEDYRAEKPARFTYADLKRITNGFKEKLGEGAHGAVFRGKLSSEIPVAVKILNSTEGEGNEFINEVGIMGKIHHINVVRLLGFCADGLHRALVYNFFSNGSLQSFIFPPEDKDHFLGWEKLQHVALGIAKGIEYLHQGCNQPIIHFDINPHNVLLDHNFTPKISDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNLDMSSPQNFHVLYPDWIHNLVDGDVHIHVEDEGDVKIAKKLAIIGLWCIQWEPVNRPSIKSVIHMLETEEENQFVVPPNPFQSTTSTTVKGLSPTRRPLQLEVIQE 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00786 623 FunFam PR5-like receptor kinase 389 594 - -
Phco2g00786 623 FunFam serine/threonine-protein kinase PBS1-like 280 388 - -
Phco2g00786 623 Gene3D Phosphorylase Kinase; domain 1 286 388 - -
Phco2g00786 623 Gene3D Transferase(Phosphotransferase) domain 1 389 595 - -
Phco2g00786 623 SUPERFAMILY Protein kinase-like (PK-like) 296 584 IPR011009 -
Phco2g00786 623 PANTHER RUST RESISTANCE KINASE LR10-RELATED 286 601 IPR045874 GO:0004672
Phco2g00786 623 Pfam Wall-associated receptor kinase galacturonan-binding 37 102 IPR025287 GO:0030247
Phco2g00786 623 ProSiteProfiles Protein kinase domain profile. 314 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00786 623 Pfam Protein tyrosine and serine/threonine kinase 316 583 IPR001245 GO:0004672|GO:0006468
Phco2g00786 623 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00786 Phco-Chr2 8677739 8679773 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco2g00786 PK_Tyr_Ser-Thr 1.8e-43 CL0016