Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00779 ATGATAGAACACAACATATGGACTATTGGTGATATTATAAACGGATTGATTTTAACAATATATGGACCAAACCAACGAAGTTTCCTTGCATATGACTCAGTATCAATTATGTTGGGACACTATGTTATACCATACTTCATAGTTAGATATGTTGTAGGCACGATATTGCTTATTGCTTTTTTGATATACAAGTGGAGAAGAAGACATTCGTCAGAATACGAAAATATTGAAAGCTACTTAGAACAAAATAGCTTGATGCCTATTCGATACACATATAAGGAAATTAAGAAGATGGCCACAGGTTTCAATGAAAAATTAGGTGAAGGAGGTTATGGCTCTGTATTCAAGGGAAAGTTGCGTAGTGGACCTTGTGTTGCTATAAAAGTGTTACGAAAATCAAAAGGTAATGGACAAGACTTTATCAATGAAGTTGCAACAATTGGAAGAATACATCATCAAAATGTAGTGCACTTAATTGGATATTGTGCTGAGGGCTCAAAACGAGCCCTAGTTTATGAGTTCATGTCTAATGGATCTCTTGACAAATTTCTATTTTCTAGAGAAGGAAATTTGCATTTAACCTATGACTCAATATATAATATAGCAATTGGAATAGCACATGGCATTTCGTATCTACACCATGGATGTGAGATGCAAATTTTGCATTTTGATATCAAACCCCACAACATTCTGCTTGATGAAAAATTTACCCCAAAAGTGTCTGACTTCGGATTGGCAAAATTATATCCAACAGACAAAAGTGTTGTGACTATGACAGCAGCAAGAGGGACAATTGGGTACATGGCTCCAGAATTGTTTTATAAAAATATTGGAAGAATATCAAATAAGTCTGATGTTTATAGCTTTGGAATGCTTTTGATGGAGATAGCAAGCAAGAGGAAAAACTTAAACCCCCATGCAGAGCATTCAAGCCAACTTTACTTTCCCCTTTGGATTTATGATCAACTTGACAAAGAGAGAGATATAGAAATGGAAGATGTCATAGAGGATGAGAAGAAAATTACAAAAAAGATGATGATAGTTTTACTTTGGTGCATACAATTAAAACCAAATGATCGTCCTTCCATTAACAAGGTAGTCAAAATGCTTGAAGGAGACATTGAGAACCTTAAAATACCTCCAAAGCCTTCTCTATATCCACATGAAACATTGGAAAGAATTTGCTCTGACCAAACAACATTGCCTGAGTTCATTAGTTCTTCAAGTTATTCCATGGAGATTGCCACTAATGCTCCACTAGATGAAAGTATTTGA 1275 0.349 MIEHNIWTIGDIINGLILTIYGPNQRSFLAYDSVSIMLGHYVIPYFIVRYVVGTILLIAFLIYKWRRRHSSEYENIESYLEQNSLMPIRYTYKEIKKMATGFNEKLGEGGYGSVFKGKLRSGPCVAIKVLRKSKGNGQDFINEVATIGRIHHQNVVHLIGYCAEGSKRALVYEFMSNGSLDKFLFSREGNLHLTYDSIYNIAIGIAHGISYLHHGCEMQILHFDIKPHNILLDEKFTPKVSDFGLAKLYPTDKSVVTMTAARGTIGYMAPELFYKNIGRISNKSDVYSFGMLLMEIASKRKNLNPHAEHSSQLYFPLWIYDQLDKERDIEMEDVIEDEKKITKKMMIVLLWCIQLKPNDRPSINKVVKMLEGDIENLKIPPKPSLYPHETLERICSDQTTLPEFISSSSYSMEIATNAPLDESI 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00779 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Phco2g00779 424 ProSiteProfiles Protein kinase domain profile. 100 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00779 424 FunFam serine/threonine-protein kinase PBS1-like 67 174 - -
Phco2g00779 424 Pfam Protein kinase domain 103 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00779 424 SUPERFAMILY Protein kinase-like (PK-like) 84 371 IPR011009 -
Phco2g00779 424 FunFam PR5-like receptor kinase 175 382 - -
Phco2g00779 424 Gene3D Transferase(Phosphotransferase) domain 1 175 379 - -
Phco2g00779 424 SMART serkin_6 100 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00779 424 ProSitePatterns Protein kinases ATP-binding region signature. 106 128 IPR017441 GO:0005524
Phco2g00779 424 PANTHER RUST RESISTANCE KINASE LR10-RELATED 73 390 IPR045874 GO:0004672
Phco2g00779 424 Gene3D Phosphorylase Kinase; domain 1 73 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00779 Phco-Chr2 8587135 8590675 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco2g00779 PK_Tyr_Ser-Thr 9.6e-50 CL0016