Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00777 ATGGCAGGTGTTGATGAGATCCACAAGGCACAAAGGGCAGAAGGCCCAGCCACGATCTTGGCAATAGCCACTGCTAATCCTCTCAACTGTGTGGAACAAAGCACCTATTCTGACTACTATTTTCGTGTCACCAAGAGTGACCATAAGACAGAGCTCAAAACAAAATTCGATCGCTTATGCAAAAAGTCAATGATTAAGAAGCGACACATGCAGTTGACAGAAGAGATGCTGAAGGAGCACCCCAACATTGGTGAGCACATGGCACCTTCATTGAATGCAAGGCAAGACTTGGTAGTGATGGAAGTAGCGAGGCTAGGAAAAGAGGCTGCAACAAAGGCCTTGGAAGAATGGGGTGAACCAAAGTCTAAAGTCACCCACCTAATCTTTTGCACCACAAGTGGTAATGACATGCCTGGTGCTGACTACCAACTCTCCAAACTCTTAGGGCTAAATCTCAACGTGAAGCGTTACATGATATACCAACAAGGATGTTATGCCGGTGGAACCGCTCTGCGTTTGGCCAAAGACTTGGCTGAAAACAACAAGGGTGCTCGTGTGTTAGTAGTTTGCTCAGAAATCACCATATTCACCTTCCGTGGCCCCAGTGAGGCTCATGTTGATAACCTTGTGGGGCAATCACTCTTTGGAGATGGTGCTTCTGCTGCCATTGTTGGTTCGGACGTAATACCCAATGTTGAGAAGCCTTTGTTTCAACTAGTGTGGACTTCTCAAACAATAGTGCCAAATACTGAAGAGGCCATGACACTGCACCTTCGTGAAGCTGGTCTGACATTCCATGTTCTCAAGGGTGTTCCTGATCTTATTTCAAACAACATTGAGAGTGTTCTTGTTGAAGCCTTTCAACCACTAAGCCTCTCTGACTATAACTCCATCTTTTGGATAGTGCATCCTGGTGGACGTGCAATTCTAGACCAAGTTGAGGAAAAGTTAGGTTTGAAGCCAGAAAAACTGCGAGCCAGTCGACATGTTCTTGGTGAGTATGGTAATATGGCAAGTACTTGTGTGCTTTTCATAATGGATGAAATGAGGAAGAAGTCCGAAGAAACTGAACTTTCCACAACTGGAGAAGGTTTTGATTGGGGAGTACTGTTTGGTTTTGGACCTGGACTCACTATTGAGACTATTGTGCTGCGTAGTGTTATGCTGTAA 1170 0.4521 MAGVDEIHKAQRAEGPATILAIATANPLNCVEQSTYSDYYFRVTKSDHKTELKTKFDRLCKKSMIKKRHMQLTEEMLKEHPNIGEHMAPSLNARQDLVVMEVARLGKEAATKALEEWGEPKSKVTHLIFCTTSGNDMPGADYQLSKLLGLNLNVKRYMIYQQGCYAGGTALRLAKDLAENNKGARVLVVCSEITIFTFRGPSEAHVDNLVGQSLFGDGASAAIVGSDVIPNVEKPLFQLVWTSQTIVPNTEEAMTLHLREAGLTFHVLKGVPDLISNNIESVLVEAFQPLSLSDYNSIFWIVHPGGRAILDQVEEKLGLKPEKLRASRHVLGEYGNMASTCVLFIMDEMRKKSEETELSTTGEGFDWGVLFGFGPGLTIETIVLRSVML 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00777 389 ProSitePatterns Chalcone and stilbene synthases active site. 156 172 IPR018088 GO:0009058|GO:0016746
Phco2g00777 389 FunFam Chalcone synthase 2 1 235 - -
Phco2g00777 389 PIRSF PKS_III 2 388 IPR011141 GO:0009058|GO:0016747
Phco2g00777 389 CDD CHS_like 16 384 - -
Phco2g00777 389 SUPERFAMILY Thiolase-like 235 386 IPR016039 GO:0016746
Phco2g00777 389 Pfam Chalcone and stilbene synthases, N-terminal domain 5 227 IPR001099 -
Phco2g00777 389 FunFam Chalcone synthase 1 236 388 - -
Phco2g00777 389 SUPERFAMILY Thiolase-like 1 227 IPR016039 GO:0016746
Phco2g00777 389 Gene3D - 1 235 IPR016039 GO:0016746
Phco2g00777 389 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 5 387 IPR011141 GO:0009058|GO:0016747
Phco2g00777 389 Pfam Chalcone and stilbene synthases, C-terminal domain 238 387 IPR012328 -
Phco2g00777 389 Gene3D - 236 389 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00777 Phco-Chr2 8520241 8521549 Dispersed