Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00769 ATGTCTGGTACTGCTGGTAAGGTCATCAAGTGCAGAGCTGCAGTGGCATGGGAACCAGAGAAGCCACTGTCGATAGAGAACATAGAAGTGGCACCACCGGGGAAAGGAGAAGTGCGTTTGAAAATCCTCTTCAACTCCCTTTGCCGCACTGATGTCTACTGGTGGGATGTTAAGGGTCAGAATCCGCTGTTTCCTCGAATATTAGGTCATGAAGCTTCAGGGATTGTGGAGAGCGTGGGCGAGGGAGTGACCCATCTGAAACCAGGAGATCATGCACTCCCAATATTCACTGGGGAGTGTGGAGAATGCAAATATTGCAAGTCAGAAGAGAGCAACCTGTGTGAAGTGCTAAGGATCAACAGTGACAGAGGAGTTATGCTCAGTGATGGCAAAACAAGGTTCTCCAAAAATGGACAACCCATTTACCACTTTCTGGGAACCTCTACATTCAGTGAATACACTGTTCTTCATGCTGGCTGTGTTGCCAAGATCAACCCTGCTGCTCCACTTGACAAAGTTTGTGTTGTCAGTTGTGGATTTTGCACAGGTTTTGGTGCTACTGTAAATGTTGCAAAACCAAAGCCTAATGATACTGTTGCTGTCTTTGGTTTAGGAGCTGTTGGTCTCGCTGCCTGTGAAGGAGCAAGGGTTTCTGGTGCATCGAGAATCATTGGGGTTGATTTACTTTCTAGTCGATTTGAACAAGCCAAAAAATTTGGGGTCACTGAATTTGTGAACCCCAAAGAGCATAACAAACCAGTTCAAGAGGTAATTGCTGAAATGACTGATGGAGGAGTAGATCGTGCTATTGAATGCACTGGAAACATCCAAGCTTCGATCTCAGCACTTGAATGCACTCATGATGGTTGGGGTGTTGCTGTACTTGTTAGTGTTCCAAAGAAGGATGTTGAATTCAAAACTCATCCTATGAAGTTCATGGAAGGAAGAACTCTCAAGGGTACCTTCTATGGCCACTACAAACCCCGCACTGATATTCCTTCTGTTGTGGAGAAGTACCTCAACAAGGAGCTGGAACTGGAGAAATTTATCACTCACACTGTGCCATTCTCAGAGATCAACAAGGCATTTGACCTTATGCTGAGAGGGGAGGGTATAAGGTGTCTCATCTGCATGGAAGAGTGA 1143 0.4567 MSGTAGKVIKCRAAVAWEPEKPLSIENIEVAPPGKGEVRLKILFNSLCRTDVYWWDVKGQNPLFPRILGHEASGIVESVGEGVTHLKPGDHALPIFTGECGECKYCKSEESNLCEVLRINSDRGVMLSDGKTRFSKNGQPIYHFLGTSTFSEYTVLHAGCVAKINPAAPLDKVCVVSCGFCTGFGATVNVAKPKPNDTVAVFGLGAVGLAACEGARVSGASRIIGVDLLSSRFEQAKKFGVTEFVNPKEHNKPVQEVIAEMTDGGVDRAIECTGNIQASISALECTHDGWGVAVLVSVPKKDVEFKTHPMKFMEGRTLKGTFYGHYKPRTDIPSVVEKYLNKELELEKFITHTVPFSEINKAFDLMLRGEGIRCLICMEE 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00769 380 SUPERFAMILY GroES-like 4 188 IPR011032 -
Phco2g00769 380 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Phco2g00769 380 CDD alcohol_DH_plants 9 376 - -
Phco2g00769 380 SUPERFAMILY GroES-like 328 376 IPR011032 -
Phco2g00769 380 Gene3D - 20 370 - -
Phco2g00769 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Phco2g00769 380 FunFam Alcohol dehydrogenase 6 14 196 - -
Phco2g00769 380 Pfam Zinc-binding dehydrogenase 206 333 IPR013149 -
Phco2g00769 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 342 IPR036291 -
Phco2g00769 380 Gene3D - 183 321 - -
Phco2g00769 380 FunFam Alcohol dehydrogenase class-P 183 321 - -
Phco2g00769 380 PANTHER ALCOHOL DEHYDROGENASE 6 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00769 Phco-Chr2 8394939 8399525 Transposed