Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00762 ATGAGATTGAAGGACACGCAAAAGCAACTGACCAGACTGACCGTGGTGTTACTGATGGCTTTAGCAGCAGCCAGCCAAGCCCTGCCCGGCTGCCAGGACTCCTGCGGAAATGTTTCAATTCCGTATCCATTTGGCATCGGCCATTCATCCACCGATAAAAAAAACTGTTTTCTTGAGGACCCATTGGAGCTTACATGCACAGACTCTGCCTTGTTTCAGGGTAACGTCCAAATTCTGAACATAAGCCTCGCCGGTAAAATGGACGTGCTCACCTTCATCTCCGGGGTTTGCAAAAACGATTCGCTTGGTAGAGTAGAAACACATGGTAACGACCCCTCTCTCAGCACACCGGCTTTCATAATTTCTAGTGAGGACAACAAGTTCGTAAGCGTAGGGTGCGACACTTACGGCTATCTCAACAGTTTCCACAGCGGCACAGAATCTTCAACCGGGTGCTTGACCAGATGCAACAGCTTAGAGAGCGTTGAAAGCATGCAGAGAAGCGGAAACTGTACGGGCATAGGGTGTTGTCAGGTGGACATTCCTCCTGGGATGAAGAATATTAGCTTGCAAGCATTCAGCTTCAACAATTTCAATTCCACTTCCGATTTCAACCAGTGCGGCTACTCCTTTGTGGTCAAAAATGGCAACTACACTTTCTCCCTCGATCATTTGAAGAGCATCCCCTTCGATAAGGCACTCATGGTCATCGATTGGAGTGTAGGAAACGACACGTGTGACGCTTCCATTCATAGAGCAGATTATGCATGCAAGAGTGATAATAGCCATTGTGAGAACTCGCCCTATGAATATGGTTACCGATGCAAATGTAATCCAGGCTTTGAGGGAAACGCCTACCTTCTCCATGGTTGCCAAGACGTTCCGGAGTGTACAAGGAAGCAACACAATTGCGAAAGTGAAGATCATTGTAGAGAAACTTCTGGCTCTTTTGAATGTTTCTGTCCTGACGGACTCATCGGAAATGGGACAAAAGAAGGCGGAGGATGCCACCCAAAGCAGCAGGCTGATCCATTTATCAAGATCGTCATTGGTGCAGGTGTAGGATTAATTGTTCTGTTTATAGGGGTTTCTTGGCTATACTTAATGTACCAGAAAAGGAAAGTTCTCAAATTAAAGGAGAAGTTCTTTCAGCAGAATGGAGGCATCATTCTGAGACAGCAACTCTCCACTAGGGAAGACTCGTCTCAGTCCACTACAATTTTCAGTGCAGAGCAACTTAAGAAAGCCACCAACAATTTTGATGAGAGCTTAATCATAGGTAAAGGAGGTTATGGTACAGTTTTCAAAGGACTTCTCTCAAATAACAAATTTGTTGCTATCAAAAAGTCCAAAATAGTGGATCAGAGCCAGGTGGAGCAATTCATTAATGAGGTCATTATACTGTCACAAATTAATCACAGGAACGTGGTCAAACTCTTGGGATGTTGTCTAGAGACAGAAGTTCCCTTACTGGTTTATGAATTTGTTAACAATGGTACCCTTTTTGATTATCTACATAATCAAGGACAAGGGGTTAATGTGTCTTGGAAAACGCGTCTAAGGATAGCTACAGAGACAGCTGCAGCTCTGTCATATCTACACTCGGCAGCTTCCATACCCATCATCCATAGAGATGTGAAGACTGCAAACATACTCTTAGATGACACTTACACTGCCAAAGTGTCTGACTTTGGAGCTTCAAGATTGGTTCCTCTTGATCAAACTGAAATAGCCACAATTGTGCAAGGAACCTTTGGCTATTTAGACCCAGAGTACATGCAATCAAGTCAGTTGACTGAAAAGAGTGATGTCTATAGCTTTGGGGTAGTGCTTGTAGAACTGTTAACAGGGGAGAAACCTTTCTCTTTTGACAGGGCAGAAGAGAAACGAAGTCTCACGGTTCACTTTCTATGTAGCTTGAAAGAGGATCGTCTATTTGATGTTCTTCAGGCGGGTATTTTGGATGAAGAAAACAAGCAGGAGCTTATGGAGGTTGCTATTCTTGCTGCTAGGTGCCTGAGACTTACAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGGCAATGGAATTAGAGGGAATAAAGCTTACAGATAAACACCCTTGGATCAATACAGGCAAAAACTTTGAGGAGGGTCAATACTTGCTTCATGAGGCACAAAGTTCTCGTGAACATGGTGATAGTAGTAGTGCCCAACAAAATACTGGATATGATAGCTTGAGAACACTTGAATTAATTGACTTTGATAATGGAAGATGA 2256 0.4388 MRLKDTQKQLTRLTVVLLMALAAASQALPGCQDSCGNVSIPYPFGIGHSSTDKKNCFLEDPLELTCTDSALFQGNVQILNISLAGKMDVLTFISGVCKNDSLGRVETHGNDPSLSTPAFIISSEDNKFVSVGCDTYGYLNSFHSGTESSTGCLTRCNSLESVESMQRSGNCTGIGCCQVDIPPGMKNISLQAFSFNNFNSTSDFNQCGYSFVVKNGNYTFSLDHLKSIPFDKALMVIDWSVGNDTCDASIHRADYACKSDNSHCENSPYEYGYRCKCNPGFEGNAYLLHGCQDVPECTRKQHNCESEDHCRETSGSFECFCPDGLIGNGTKEGGGCHPKQQADPFIKIVIGAGVGLIVLFIGVSWLYLMYQKRKVLKLKEKFFQQNGGIILRQQLSTREDSSQSTTIFSAEQLKKATNNFDESLIIGKGGYGTVFKGLLSNNKFVAIKKSKIVDQSQVEQFINEVIILSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYLHNQGQGVNVSWKTRLRIATETAAALSYLHSAASIPIIHRDVKTANILLDDTYTAKVSDFGASRLVPLDQTEIATIVQGTFGYLDPEYMQSSQLTEKSDVYSFGVVLVELLTGEKPFSFDRAEEKRSLTVHFLCSLKEDRLFDVLQAGILDEENKQELMEVAILAARCLRLTGEERPSMKEVAMELEGIKLTDKHPWINTGKNFEEGQYLLHEAQSSREHGDSSSAQQNTGYDSLRTLELIDFDNGR 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00762 751 SUPERFAMILY EGF/Laminin 292 328 - -
Phco2g00762 751 SMART egf_5 245 292 IPR000742 -
Phco2g00762 751 SMART egf_5 296 337 IPR000742 -
Phco2g00762 751 ProSitePatterns Protein kinases ATP-binding region signature. 426 449 IPR017441 GO:0005524
Phco2g00762 751 CDD STKc_IRAK 426 693 - -
Phco2g00762 751 FunFam Fibrillin 2 288 332 - -
Phco2g00762 751 Pfam Wall-associated receptor kinase galacturonan-binding 31 85 IPR025287 GO:0030247
Phco2g00762 751 CDD EGF_CA 293 327 - -
Phco2g00762 751 Gene3D Transferase(Phosphotransferase) domain 1 496 709 - -
Phco2g00762 751 ProSiteProfiles Protein kinase domain profile. 420 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00762 751 Gene3D Phosphorylase Kinase; domain 1 387 495 - -
Phco2g00762 751 SMART serkin_6 420 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00762 751 Pfam Protein kinase domain 424 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00762 751 FunFam Wall-associated receptor kinase 2 496 713 - -
Phco2g00762 751 Pfam Calcium-binding EGF domain 293 326 IPR001881 GO:0005509
Phco2g00762 751 FunFam Wall-associated receptor kinase 2 390 495 - -
Phco2g00762 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Phco2g00762 751 SUPERFAMILY Protein kinase-like (PK-like) 399 691 IPR011009 -
Phco2g00762 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 700 IPR045274 GO:0007166
Phco2g00762 751 Gene3D Laminin 243 335 - -
Phco2g00762 751 ProSiteProfiles EGF-like domain profile. 293 331 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00762 Phco-Chr2 8257128 8260175 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phco2g00762 Pkinase 4.8e-51 CL0016