Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00761 ATGGAGAGAAGCGGAAACTGTACGGGCATAGGGTGTTGTCAGGTGGACATTCCTCCTAGGATGAAGAATATTAGCTTGCAAGCATATAGCTTCAACAATTTCAATTCCACTTCCGATTTCAACCAGTGCGGCTACTCCTTTGTGGTCAAAAATGGCAACTACACTTTCTCCCTCGATCATTTGAAGGGCATCAATTTCACTATGGCACCCATGGTCATGGATTGGAGTGTAGGAAACGACACGTGTAACGCTTCCATGAACAGAGACTATTATGCATGCAAGAGTCATAATAGCGATTGTAAGAACTCGCCCTATAAATATGGTTACCGATGCAAATGTAAACAAGGCTTTGAGGGAAACCCATACCTTTCCGATGGTTGCAAAGACATTCCGGAGTGTACAAGAAAGCAACACAATTGCGATAGTGAAGATCATTGTAGAGAAACTTCTGGCTCTTTTGAATGTTTCTGTCCTGACGGACTCATCGGAAATGGGACAAAAGAAGGCGGAGGATGCCACCGGCCTGATCAATTTACCAAGATCGTCATTGGTGTAGGTGTAGGATTAATTGCTCTGTTTATAGGGGTTTCTTGGATATACTTGATGTACCAGAAAAGGAAAGTCTTCAAATTAAAGGAGAAGTTCTTTCAGCAGAATGGAGGCATCATTCTGAGACAGCAACTCTCCACTAGGGAAGACTCATCTCAATCCACTACAATTTTCAGTGCAGAGCAACTTAAGAAAGCCACCAACAATTTTGATGAGAGCTTAATCGTAGGTAAAGGAGGTTACGGTACAGTTTTCAAAGGAATTCTCTCAAATAACAAAGTTGTTGCTATAAAAAAGTCCAAAATAGTGGATCAGAGCCAGGTGGAGCAATTCATTAATGAGGTCATTATACTGTCACAAATTAATCACAGGAACGTGGTCAAACTCTTGGGATGTTGTCTAGAGACAGAAGTTCCCTTACTGGTTTATGAATTTGTTAACAATGGTACCCTTTTTGATTATCTACATAATCAAGGACAAGGGGTTAATTTGTCTTGGAAAACGCGTCTAAGGATAGCTACAGAGACAGCTGCAGCTCTGTCATACCTACACTCGGCAGCTTCCATACCCATCATCCATAGAGATGTGAAGACTGCAAACATACTCTTAGATGACACTTACACTGCCAAAGTGTCTGACTTTGGAGCTTCAAAATTGGTTCCTCTTGACCAAACTGAAATAGCCACAATTGTGCAAGGAACCTTTGGCTATTTAGATCCAGAGTACATGCAATCAAGTCAGTTGACTGAAAAGAGTGATGTCTATAGCTTTGGGGTAGTGCTTGTAGAACTGCTAACAGGGGAGAAACCTTTCTGTTTTGACAGGGCAGAAGAGAAACGAAGTCTCACGGTTCACTTTCTATGTAGCTTGAAAGAGGATCGTCTATTTGATGTTCTTCAGGTGGGTATTTTGGATGAAGAAAACAAGCAGGAGCTTATGGAGGTTGCTATTCTTGCTGCCAGGTGCCTGAGACTTATAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGGCAATGGAATTAGAGGGAATAAAGCTTACAGAGAAACACCCTTGGATCAATACAGGCAAAAACTCTGAGGAGGGTCAATACTTGCTTCATGAGGCACAAAGCTCTCGTGAACATGGTGATAGTAGTAGTGCCCAACAAAATACTGGATATGATAGCTTGAGAGCAGTTGAATTAATTGACTTTGGTAATGGAAGATGA 1755 0.4188 MERSGNCTGIGCCQVDIPPRMKNISLQAYSFNNFNSTSDFNQCGYSFVVKNGNYTFSLDHLKGINFTMAPMVMDWSVGNDTCNASMNRDYYACKSHNSDCKNSPYKYGYRCKCKQGFEGNPYLSDGCKDIPECTRKQHNCDSEDHCRETSGSFECFCPDGLIGNGTKEGGGCHRPDQFTKIVIGVGVGLIALFIGVSWIYLMYQKRKVFKLKEKFFQQNGGIILRQQLSTREDSSQSTTIFSAEQLKKATNNFDESLIVGKGGYGTVFKGILSNNKVVAIKKSKIVDQSQVEQFINEVIILSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYLHNQGQGVNLSWKTRLRIATETAAALSYLHSAASIPIIHRDVKTANILLDDTYTAKVSDFGASKLVPLDQTEIATIVQGTFGYLDPEYMQSSQLTEKSDVYSFGVVLVELLTGEKPFCFDRAEEKRSLTVHFLCSLKEDRLFDVLQVGILDEENKQELMEVAILAARCLRLIGEERPSMKEVAMELEGIKLTEKHPWINTGKNSEEGQYLLHEAQSSREHGDSSSAQQNTGYDSLRAVELIDFGNGR 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00761 584 ProSitePatterns Protein kinases ATP-binding region signature. 259 282 IPR017441 GO:0005524
Phco2g00761 584 ProSiteProfiles EGF-like domain profile. 129 167 IPR000742 -
Phco2g00761 584 FunFam Fibrillin 2 124 168 - -
Phco2g00761 584 CDD STKc_IRAK 259 526 - -
Phco2g00761 584 FunFam Wall-associated receptor kinase 2 223 328 - -
Phco2g00761 584 Gene3D Transferase(Phosphotransferase) domain 1 329 546 - -
Phco2g00761 584 SMART serkin_6 253 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00761 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 374 386 IPR008271 GO:0004672|GO:0006468
Phco2g00761 584 SMART egf_5 81 128 IPR000742 -
Phco2g00761 584 SMART egf_5 132 173 IPR000742 -
Phco2g00761 584 FunFam Wall-associated receptor kinase 2 329 546 - -
Phco2g00761 584 Gene3D Phosphorylase Kinase; domain 1 220 328 - -
Phco2g00761 584 Pfam Calcium-binding EGF domain 129 162 IPR001881 GO:0005509
Phco2g00761 584 Gene3D Laminin 79 172 - -
Phco2g00761 584 MobiDBLite consensus disorder prediction 550 570 - -
Phco2g00761 584 SUPERFAMILY EGF/Laminin 129 164 - -
Phco2g00761 584 SUPERFAMILY Protein kinase-like (PK-like) 232 524 IPR011009 -
Phco2g00761 584 ProSiteProfiles Protein kinase domain profile. 253 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00761 584 CDD EGF_CA 129 163 - -
Phco2g00761 584 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 7 534 IPR045274 GO:0007166
Phco2g00761 584 Pfam Protein kinase domain 258 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00761 Phco-Chr2 8237845 8241202 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phco2g00761 Pkinase 1.9e-50 CL0016