Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00745 ATGTCATTGGTTATATCTACGGAGTTGGCTGATACATCGTATGGGAATGCCAAGCTCTACACACTAAAGGGAACTGATGTTACACCTGATCTTTCCTCCCACAATTTTGTTCCAGATAAGCACAGAAACATGTATATCACAGATTCTTACTCCAGTGAGAATTATGAAAAGTACTTCCGTTATTCACCATCAGAAGAACTGATAGAACCGTCTAGTTCCAGCATATCAGGAAATTCAGTTCACCCTGATGGTGCCTCTTCTTACCTGCTCAGAGCTAGTTCAGGAACTTCTGTGATTGTTAATAACCCATTTGACACTCGTATCCTGTCTACAAGGCGTCGCAATGCCTATCAGTCCAATTTTGAATCAGATTTCGTGGAAAATAGGAGCCATGATGGCCTTGACTTTGATGGTGAAATGAAATTAAAACTACAAGAATTGGAGAGGGTTTTATTTTCTGATGAAGAAGAGGAGGAGGAAGACATATTTGAGACTGTCCAAAGCATGGAGATTGATCCTGACATGGCTGAGTGGGCCAATCCGCTTCAAGATATGCTACTTCATGACTCACCAAAGGAGTCCTCATCCTCAGATTCTTCCAATATTAGCAGCATAAGTAGCACTACCAAAGAAACTTCACAGAACTCGCCCCAGACCCTCAAACAATTACTCTGTGATTGTGCTAGAGCACTTTCAGAAGGAAATGAAGAGCAAGCCACATCTATGATAAACAATCTCAGGCAAATGGTCTCAATTCAGGGGGAACCTTCTCAAAGAATTGCAGCCTACATGGTGGAAGGGCTTGCAGCTCGTGTTGCTTCATCTGGAAAATGCATCTATCAAGCGTTGAGATGCAAAGAACCTCCTTCTTCAGATCGTCTGGCAGCTATGCAGATCCTATTTGAGGTCTGCCCGTGTTTTAAATTCGGATACATTGCTGCGAATGGCGCAATAGCTGAGGCTGTTAGAGATGAAAAGAAGGTTCACATAATAGACTTTGACATTAGCCAAGGAACTCAGTACATAACTCTAATACAAACACTTGCATCAATGCCAGGTAGACCACATCATGTGAGATTAACTGGGGTGGATGATCCTGAGACTGTGCAGCGCTCCATTGGTGGCATGAGCATCATAGGACAAAGGCTTGAAAAGCTGGCAGAGGAACTTGGATTGCCATTTGAGTTTCAAGCAGTGGCTTCAAAGACCTCAATTGTCTCACCATCAATGCTCAATTGTCGTCCGGGTGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCGTGATGAAACTGTATCCACAGTGAACGAGAGGGACCAACTTCTTCGCATGGTTAAGTGCTTGAATCCAAAACTTGTGACAATTGTGGAGCAGGACATGAACACCAACACCTCCCCTTTTCTCCAAAGATTTGTTGAAGCATACAATTACTACTCTGCTGTGTTTGACACACTTGATGCAACTCTTCCAAGGGAGAGCCAGGACAGGATGAATGTTGAAAGGCAATGCTTGGCAAAGGACATTGTCAACATTGTGGCTTGTGAGGGCGAGGATCGAATAGAACGGTATGAAGTCGCCGGAAAGTGGAGGGCACGGTTGACAATGGCTGGCTTCACTCCATCCCCAATGAGCACAAATGTGAGAGAAGCAATCAGGAAACTGATTATTAAGCAGTACTGTGACAGGTTCAAGATAAAGGAGGAAATGGGAGCACTTCATTTTGGGTGGGAAGACAAAAACTTAATTGTTGCTTCAGCATGGAAGTGA 1776 0.4381 MSLVISTELADTSYGNAKLYTLKGTDVTPDLSSHNFVPDKHRNMYITDSYSSENYEKYFRYSPSEELIEPSSSSISGNSVHPDGASSYLLRASSGTSVIVNNPFDTRILSTRRRNAYQSNFESDFVENRSHDGLDFDGEMKLKLQELERVLFSDEEEEEEDIFETVQSMEIDPDMAEWANPLQDMLLHDSPKESSSSDSSNISSISSTTKETSQNSPQTLKQLLCDCARALSEGNEEQATSMINNLRQMVSIQGEPSQRIAAYMVEGLAARVASSGKCIYQALRCKEPPSSDRLAAMQILFEVCPCFKFGYIAANGAIAEAVRDEKKVHIIDFDISQGTQYITLIQTLASMPGRPHHVRLTGVDDPETVQRSIGGMSIIGQRLEKLAEELGLPFEFQAVASKTSIVSPSMLNCRPGEALVVNFAFQLHHMRDETVSTVNERDQLLRMVKCLNPKLVTIVEQDMNTNTSPFLQRFVEAYNYYSAVFDTLDATLPRESQDRMNVERQCLAKDIVNIVACEGEDRIERYEVAGKWRARLTMAGFTPSPMSTNVREAIRKLIIKQYCDRFKIKEEMGALHFGWEDKNLIVASAWK 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00745 591 MobiDBLite consensus disorder prediction 189 217 - -
Phco2g00745 591 MobiDBLite consensus disorder prediction 187 217 - -
Phco2g00745 591 ProSiteProfiles GRAS family profile. 211 591 IPR005202 -
Phco2g00745 591 Pfam GRAS domain family 220 591 IPR005202 -
Phco2g00745 591 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 198 586 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00745 Phco-Chr2 7960937 7962712 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco2g00745 GRAS 3e-134 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00745 2 7960937 7962712 Phco2g00745 2 7960937 7962712 ECH
Phco2g00745 2 7960937 7962712 Phco7g01341 7 12142174 12144348 PCT