Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00726 ATGTTCCCATCCAACAACTTCAACAGCAACACCATCAACAGCAACAGAGACACCACCTTTTTCTCCGTTGCTGGCGGTGCCAACTGCAAGTTCTGGTTAATGGCCGCTGTAGCCTCGCCCTCTACTCCGGCGGTGGTTTTCACCGCTCTCGCCGGCGTCGTCATCGTCGCCGTGATATTCTACGGCGCCAGTAGGGGCCGGCTAAAATCACCATGGTCACAAAGGAAAAGAAAACATGCTCTGTCATCTCAGCAATGGAAATGCTTGTTTACAGAAGATGGTAAATTCTGTGATGGTGGAAATAAGTTCCTGAAAAGAGTTCGCAGTGGAGGTGTTGATCCTAGTATCAGGGCTGAGGTTTGGCCATTCTTGCTTGGAGTGTATGACTTGGGCAGCAGCAAAGACGAAAGAGATGTTATAAGAACTCAAAATAGAAAGCAGTATGAGAAACTCCGCAGACAATGTCGGAAACTTGTGAAGCAAAGTAATGAGAGAAATAAGTTAAATGAAGTTGGTGAAATCAGCTTTGAGGGAGATGGTAAAAGTCTGTCTCCAGATTCTGGTTCTTCCAGTTCTGACGATGCAGCCAGTGCTAGGGAATCTCTTTCTAGTGAGGATAGGAGCCCTGATGTTGAACATTCCGACAATCTGTCCAGTGCCCTGTTGGAAGGGGAAGATGTTCCTAATGCGAACAACGCTGATGCCTCTACACTGGATACTGATTTCTCTGATTCGGACTCCTCTGAAGGTCCTGAAGTAATTCAGGCAGTTCCTTCTGATGATGTTCAAGAACATAACAATCCAAACGAAGCTTCCCGGGAAGTATCTTCTCCCACCAAAGCAAAAATCCCATCAAAGGCACCAACCAATGAAGATTTTTCCACCTGGCAACGAATTATCCGACTTGATGCAGTACGTGCCAATGCTGAATGGATGTCATGTTACCCATCTCATCCCTCATTATCAGACAGTAGGGCACGTCGAACTGCGGAGGCTGTTGGCTTGAAGGATTATGGTCACCTAGAGGCTGGCAGAATCTTCCATGCTGCTAGACTAGTTGCTATTCTTGAAGCATATGCACTATATGACTCTGACATTGGCTACTGCCAAGGTATGAGTGATCTGCTATCTCCTATAGTTAGTGTTATATCAGAGGATCATGAGGCTTTCTGGTGTTTTGTTGGATTCATGAAGAAGGCACGGCAAAATTTTAGGCTTGATGAAGTGGGTATTCGCAGGCAACTGGATTTAGTCGCAAAAATAATCAAGTTTAAGGATTCCCACCTTTTTAGGCATTTGGAAAAGCTTCAGGCTGAGGATTGTTTTTTTGTCTATAGAATGGTGGTTGTAATGTTTCGAAGGGAATTGACATTTGAACAGACCCTTTGCCTATGGGAAGTGATGTGGGCGGATCAAGCGGCTATCAGGGCAGGTATTGGGAAATCTGCGTGGAGCAGAATTAGGCAGCGTGCTCCACCAACAGAAGATTTATTGCTTTATGCAATTGCAGCTTCGGTGTTGCAGAAGAGGAAATTGATCATTGAGAAGTACAGCAGCATGGATGAGATCATTAGGGAATGCAATAGTATGTCAGGTCATCTTGATGTTTGGAAACTGCTTGATGATGCACATAACTTAGTGGTCATCCTGCATGACAAAGTAGAGACATCATTCTCATGA 1680 0.4506 MFPSNNFNSNTINSNRDTTFFSVAGGANCKFWLMAAVASPSTPAVVFTALAGVVIVAVIFYGASRGRLKSPWSQRKRKHALSSQQWKCLFTEDGKFCDGGNKFLKRVRSGGVDPSIRAEVWPFLLGVYDLGSSKDERDVIRTQNRKQYEKLRRQCRKLVKQSNERNKLNEVGEISFEGDGKSLSPDSGSSSSDDAASARESLSSEDRSPDVEHSDNLSSALLEGEDVPNANNADASTLDTDFSDSDSSEGPEVIQAVPSDDVQEHNNPNEASREVSSPTKAKIPSKAPTNEDFSTWQRIIRLDAVRANAEWMSCYPSHPSLSDSRARRTAEAVGLKDYGHLEAGRIFHAARLVAILEAYALYDSDIGYCQGMSDLLSPIVSVISEDHEAFWCFVGFMKKARQNFRLDEVGIRRQLDLVAKIIKFKDSHLFRHLEKLQAEDCFFVYRMVVVMFRRELTFEQTLCLWEVMWADQAAIRAGIGKSAWSRIRQRAPPTEDLLLYAIAASVLQKRKLIIEKYSSMDEIIRECNSMSGHLDVWKLLDDAHNLVVILHDKVETSFS 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00726 559 SMART tbc_4 108 517 IPR000195 -
Phco2g00726 559 Coils Coil 141 161 - -
Phco2g00726 559 MobiDBLite consensus disorder prediction 182 198 - -
Phco2g00726 559 ProSiteProfiles TBC/rab GAP domain profile. 111 472 IPR000195 -
Phco2g00726 559 MobiDBLite consensus disorder prediction 162 289 - -
Phco2g00726 559 MobiDBLite consensus disorder prediction 230 252 - -
Phco2g00726 559 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 90 432 IPR035969 -
Phco2g00726 559 Pfam Rab-GTPase-TBC domain 351 471 IPR000195 -
Phco2g00726 559 Gene3D - 408 555 - -
Phco2g00726 559 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 70 527 - -
Phco2g00726 559 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 409 546 IPR035969 -
Phco2g00726 559 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 273 404 - -
Phco2g00726 559 MobiDBLite consensus disorder prediction 260 289 - -
Phco2g00726 559 MobiDBLite consensus disorder prediction 199 213 - -
Phco2g00726 559 FunFam GTPase-activating protein gyp7 isoform X1 408 553 - -
Phco2g00726 559 FunFam Ypt/Rab-GAP domain of gyp1p superfamily protein 274 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00726 Phco-Chr2 7578760 7582202 Transposed