Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00725 ATGGCCACACTTCAAGCTTCACTTCTCTCCAAACCTTCCCTTCCCTTTCCATTTCCATTCCCATTCTCCTTCCTCTCAGCGAACCACTCCCCATTCTCCCTCTCCTTCCACTCCACGCGCCGCCTTTCCTCCACGCTCCTCTGCTGCACCTTTCGCTCTGACAGCGTCAGTTCCCGCTCTGAACCCAATCACAACCCCTCCGAATTCGGTTCGGGCAACGCCGAACCGGACCCCAGCGCGGCTATAATTTATTCGACGGAAGAAGGTGCAGTTTTGGTTTCTGATTCGGGCGAGGCGAGTTTGGAAGGTGCGGAGACTGTGCTGCGGAGTGGCGCGGATTTGGAGAGCGAAGGAAATGTTGCGAATGGAAGGTTTTCGATAGTGGTGTTATTTGTGGGACTGTGGGTGAAGGCGAGGGAGCGTGTAAAGAAGGCTTTGGCGGAGTTTCTTGATTGGTGGCCGTTTTGGCGGCAGGAGAAGCGCGTCGAGCGGTTGATCGCGGACGCCGACGCGAACCCGCAAGATGCTGCTAAACAGAGTGCTCTGTTTGTGGAACTCAATAAGCACAGTCCTGAATCTGTCATCAAGCGGTTTGAACAAAGGGATCGAGCTGTGGACAGTAGAGGGGTTGCGGAATATCTTCGAGCTCTTGTGATTACTAATTCTATTAGTGAATATCTTCCAGATGAGGATTCTGGAAAAACTTCTAGCCTTCCTACCCTGTTGCAAGAGTTGAAGCAACGTGCATTGGGTAACTCAGATGAAACTTTTCTTAATCCTGGAATATCTGAGAAGCAGCCATTACATGTGGTTATGGTTGATCCAAAAGTATCGAATAAATCACGTTTTGCACAAGAGCTTATCTCAACTATTTTGTTTACCATAGCTGTGGGGTTGGTCTGGTTTATGGGTGCTGCTGCACTTCAAAAATACATAGGAAGCTTGGGGGGGATTGGACCTTCAGGAGTTGGATCAAGTTCTTCCTATGCCCCAAAGGAGCTAAATAAGGAAGTGATGCCAGAAAAGAATGTAAAAACCTTTAAGGATGTGAAAGGCTGTGATGATGCAAAACAAGAACTTGAGGAAGTTGTGGAGTACCTAAAGAATCCATCTAAGTTTACACGCCTTGGAGGAAAGTTGCCAAAGGGGATTCTTTTGACCGGAGCACCTGGAACTGGAAAAACTCTGCTAGCGAAGGCTATTGCTGGAGAAGCTGGTGTTCCCTTTTTCTATCGGGCAGGCTCTGAATTTGAGGAGATGTTTGTTGGTGTTGGTGCTCGGCGTGTAAGATCATTATTTCAAGCTGCGAAAAAGAAGGCACCTTGTATCATTTTCATCGATGAAATTGATGCTGTTGGATCAACAAGAAAACAATGGGAGGGTCATACAAAGAAGACATTACATCAACTTCTTGTCGAAATGGATGGGTTTGAACAGAATGAGGGAATAATATTAATGGCTGCAACAAACTTGCCTGATATTCTTGATCCAGCTTTAACAAGGCCTGGTAGATTCGATCGACATATTGTTGTACCAAATCCAGATGTAAGAGGTCGGCAAGAAATACTGGAACTCTATCTGCAAGATAAGCCTATAGCTGATGATGTAGATGTTAAAGCAATTGCTCGTGGTACCCCTGGGTTCAATGGGGCAGATCTTGCGAACTTGGTAAATGTTGCTGCCATTAAAGCTGCAGTCGAAGGTGCAGAGAAAGTAACAGCTTCACAGTTGGAGTTTGCAAAAGACAGAATAATTATGGGTACTGAGCGGAAAACAATGTTTATATCTGAAGAGTCAAAGAAGCTCACTGCCTATCATGAGAGTGGCCATGCAATTGTTGCCCTTAACACTGATGGTGCACATCCAATTCACAAGGCAACAATCATGCCACGTGGATCTGCTTTAGGAATGGTTACTCAGCTTCCCTCAAGTGACGAGACATCAATAAGCAAGAAACAGTTGTTAGCTCGCCTTGATGTTTGTATGGGAGGAAGAGTTGCAGAAGAGCTTATCTTTGGCCGGGATTATGTCACAACTGGAGCAAGTAGTGATCTCCACACTGCTACCGAGCTTGCCCAATACATGGTATCAAATTGTGGGATGAGTGAGGCAATTGGGCCAGTTCATATAAAAGAGCGACCAAGTTCTGAAATGCAGTCACGTATTGATGCAGAGGTTGTGAAACTCCTTCGGGAAGCATATGATCGTGTTAAAGCCCTTCTGAAAAAGCATGAGAAGGCATTACATGTGTTGGCGCACGCATTATTAGAGTATGAGACACTCAGTGCAGAAGAAATCAGGCGAACACTTCTCCCATATCGGGAAGGACGGCTGCCAGAACAACCGGAACAAGAAGCACCGGAAGGGGATCTTGTGTTAGTGTAA 2385 0.4629 MATLQASLLSKPSLPFPFPFPFSFLSANHSPFSLSFHSTRRLSSTLLCCTFRSDSVSSRSEPNHNPSEFGSGNAEPDPSAAIIYSTEEGAVLVSDSGEASLEGAETVLRSGADLESEGNVANGRFSIVVLFVGLWVKARERVKKALAEFLDWWPFWRQEKRVERLIADADANPQDAAKQSALFVELNKHSPESVIKRFEQRDRAVDSRGVAEYLRALVITNSISEYLPDEDSGKTSSLPTLLQELKQRALGNSDETFLNPGISEKQPLHVVMVDPKVSNKSRFAQELISTILFTIAVGLVWFMGAAALQKYIGSLGGIGPSGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPIADDVDVKAIARGTPGFNGADLANLVNVAAIKAAVEGAEKVTASQLEFAKDRIIMGTERKTMFISEESKKLTAYHESGHAIVALNTDGAHPIHKATIMPRGSALGMVTQLPSSDETSISKKQLLARLDVCMGGRVAEELIFGRDYVTTGASSDLHTATELAQYMVSNCGMSEAIGPVHIKERPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKALHVLAHALLEYETLSAEEIRRTLLPYREGRLPEQPEQEAPEGDLVLV 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00725 794 Gene3D - 514 587 - -
Phco2g00725 794 FunFam ATP-dependent zinc metalloprotease FTSH 11 331 513 - -
Phco2g00725 794 SUPERFAMILY FtsH protease domain-like 595 770 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Phco2g00725 794 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 2 785 IPR005936 GO:0004176|GO:0004222|GO:0016020
Phco2g00725 794 CDD RecA-like_FtsH 346 511 - -
Phco2g00725 794 Pfam AAA+ lid domain 535 578 IPR041569 -
Phco2g00725 794 PANTHER METALLOPROTEASE M41 FTSH 137 776 - -
Phco2g00725 794 MobiDBLite consensus disorder prediction 55 72 - -
Phco2g00725 794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 346 613 IPR027417 -
Phco2g00725 794 ProSitePatterns AAA-protein family signature. 483 501 IPR003960 GO:0005524|GO:0016887
Phco2g00725 794 NCBIfam ATP-dependent zinc metalloprotease FtsH 275 766 IPR005936 GO:0004176|GO:0004222|GO:0016020
Phco2g00725 794 MobiDBLite consensus disorder prediction 55 76 - -
Phco2g00725 794 Coils Coil 727 747 - -
Phco2g00725 794 FunFam ATP-dependent zinc metalloprotease FtsH 514 588 - -
Phco2g00725 794 Pfam Peptidase family M41 594 768 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Phco2g00725 794 SMART AAA_5 380 515 IPR003593 GO:0016887
Phco2g00725 794 FunFam ATP-dependent zinc metalloprotease FtsH 588 776 - -
Phco2g00725 794 Gene3D - 324 513 IPR027417 -
Phco2g00725 794 Pfam ATPase family associated with various cellular activities (AAA) 384 512 IPR003959 GO:0005524|GO:0016887
Phco2g00725 794 Gene3D Peptidase M41 588 774 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00725 Phco-Chr2 7548208 7568574 Dispersed/Transposed