Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00712 ATGGACAGCCGAAACGTTGTTGTTTGCGACAACGGAACCGGGTATGTGAAGTGTGGATTTTCTGGGGAGAATTTCCCCACATCGGTCTTTCCTTGTGTAGTGGGAAGGCCAATGCTCCGTTACGAAGAATCACTTACCGAACAAGAGCTTAAGGATATTGTTGTTGGCGAAAGCTGTGCAGATTTGCGACATCAGCTTGATGTATCTTATCCTGTGAACAACGGGATAGTGCAAAATTGGGATGATATGTGTCATGTATGGGATCATGCATTTTACAATGAATTGAAGATTAATCCTCCAGACTGCAAGATTCTACTCACCGATCCGCCTCTTAATCCTTCCAAGAATCGTGAAAAAATGGTTGAGATGATGTTTGAGAAGTACAATTTTGCAGGATTGTTTATCCAAATCCAAGCTGTTCTGACATTATATGCTCAAGGTTTGTTAACTGGATTAGTTATTGACTCCGGTGATGGTGTCACCCATGTGGTTCCTGTTGTTGATGGCTATTCTTTTCCTCATCTAACTAAACGAATGAATGTTGCTGGTCGACATATAACCTCCTATCTTGTTGATTTGCTTTCAAGGAGGGGGTATGCATTAAATAGGACTGCTGATTTTGAGACTGTTAGGGAAATCAAAGAGAAGCTATGCTATATAAGTTACGACTACAAGAGGGAATACCAGTTGGGGCTTGAGACCACCATCCTTGTTAAAAATTATACTCTTCCGGATGGAAGGGTCATTAAAGTAGGCACTGAAAGGTTCCAAGCTCCTGAGGCTCTTTTCACTCCGGAACTTATAGATGTAGAAGGTGATGGAATGGCCGACATGGTTTTTCGCTGCATTCAAGAAATGGATATTGACAATCGGATGATGCTATATCAACACATAGTTTTAAGTGGAGGGAGCACAATGTATCCTGGATTACCAAGCCGATTGGAAAAGGAAATACTTGATCGTTATCTTGATGTTGTCCTGAAGGGTAACAGAGATGGATTAAAGAAATTACGACTAAGAATCGAGGATCCACCACGCAGGAAGCACATGGTGTACCTTGGCGGCGCTGTACTTGCAGGAATAATGAAGGATGCACCAGAGTTTTGGATTAACAGGGAAAATTATCTAGAAGAAGGAATTGCTTGCTTGAGCAGGTGTGGCCAGGCATGA 1170 0.4222 MDSRNVVVCDNGTGYVKCGFSGENFPTSVFPCVVGRPMLRYEESLTEQELKDIVVGESCADLRHQLDVSYPVNNGIVQNWDDMCHVWDHAFYNELKINPPDCKILLTDPPLNPSKNREKMVEMMFEKYNFAGLFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYALNRTADFETVREIKEKLCYISYDYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLDVVLKGNRDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINRENYLEEGIACLSRCGQA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00712 389 FunFam Actin, alpha skeletal muscle 1 162 - -
Phco2g00712 389 SMART actin_3 4 387 IPR004000 -
Phco2g00712 389 SUPERFAMILY Actin-like ATPase domain 147 384 IPR043129 -
Phco2g00712 389 Pfam Actin 2 383 IPR004000 -
Phco2g00712 389 CDD NBD_sugar-kinase_HSP70_actin 7 190 - -
Phco2g00712 389 Gene3D Actin; Chain A, domain 4 181 272 - -
Phco2g00712 389 PRINTS Actin signature 116 129 IPR004000 -
Phco2g00712 389 PRINTS Actin signature 62 84 IPR004000 -
Phco2g00712 389 PRINTS Actin signature 237 253 IPR004000 -
Phco2g00712 389 PRINTS Actin signature 25 34 IPR004000 -
Phco2g00712 389 PRINTS Actin signature 141 160 IPR004000 -
Phco2g00712 389 FunFam Actin-related protein 2 181 272 - -
Phco2g00712 389 SUPERFAMILY Actin-like ATPase domain 2 154 IPR043129 -
Phco2g00712 389 Gene3D - 7 379 - -
Phco2g00712 389 PANTHER ACTIN 7 379 IPR004000 -
Phco2g00712 389 Gene3D - 139 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00712 Phco-Chr2 7391402 7402717 Proximal