Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00702 ATGGCTGTGGAACTCATGGGGTTCCCCAAAATCGATGATCAAAAGGCTATCCAAGAGGCTGCATCGGAAGGCCTCAAGGGCATGGAACACCTGATCCGAATCCTCTCCCACCAACCCTCTCACTTGAACACTGACCTCACCGACGTTACCGTCTCCAAGTTCAAGAAACTCATCTCCCTCCTCAACCGAACCGGCCACGCTCGCTTCAGACGTGCTCCGGTTCAGGCCCCTCAACCGGTTCAAACCCCCCAGCCTGTTCAAACCCCCGCACCGGTTCACAATCCTCCCTCTGCACCGCTCCATCTTCCTCCTCCGCAAACCGCCAACCTCTCTCTGCCGGCGCTCTTCGCGTCGCCGGCGCCGGTTCACCATGCGCCGGGCAGCGTCACGCTCGACTTCACGAAGCCGCACAACGCGCTCCGGAACTCCAAGGCCAAGTCCGTGGAGCTCGAGTTCTCGAAGGAGACCTTCAGCGTCTCCTCCAACTCCTCCTTCATGTCCTCCGCCATCACCGGCGACGGCAGCGTCTCCAACGGCAAGATCTTTCTCGCCCCGCCGCCGCCGCCAGCGACCTCCGCCGTAAAACCGCCGGCGTTCAAGAAACGCTGCCTCGAGCACCGCGAACACTCCGACGACGTGTCCGGATCCGGCAAGTGCCACTGCGTCAAGCGAAGGAAAAATAGGGTGAAGAAGACGGTGAGAGTGCCGGCGATAAGTTCAAAGATCGCCGATATTCCGCCGGACGAGTACTCGTGGAGGAAGTACGGTCAGAAACCGATCAAGGGTTCACCGTACCCTCGGGGGTATTACAAGTGCAGCACGGTGAGAGGGTGTCCCGCGAGGAAACACGTGGAGCGCGCACCAGACGATCCGGCGATGCTGATAGTGACGTACGAGGGGGAGCACAGGCACGCGGTTCAGGCCGCGATGCAGGAGAACGCAGCCGGAGTGGTGGGTTTGGTGTTCGAGTCAACGTAG 978 0.6074 MAVELMGFPKIDDQKAIQEAASEGLKGMEHLIRILSHQPSHLNTDLTDVTVSKFKKLISLLNRTGHARFRRAPVQAPQPVQTPQPVQTPAPVHNPPSAPLHLPPPQTANLSLPALFASPAPVHHAPGSVTLDFTKPHNALRNSKAKSVELEFSKETFSVSSNSSFMSSAITGDGSVSNGKIFLAPPPPPATSAVKPPAFKKRCLEHREHSDDVSGSGKCHCVKRRKNRVKKTVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPAMLIVTYEGEHRHAVQAAMQENAAGVVGLVFEST 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00702 325 Pfam Plant zinc cluster domain 200 244 IPR018872 -
Phco2g00702 325 ProSiteProfiles WRKY domain profile. 241 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco2g00702 325 SUPERFAMILY WRKY DNA-binding domain 244 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco2g00702 325 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 311 IPR044810 GO:0003700
Phco2g00702 325 Pfam WRKY DNA -binding domain 248 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco2g00702 325 Gene3D WRKY domain 233 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco2g00702 325 FunFam WRKY transcription factor 65 230 307 - -
Phco2g00702 325 MobiDBLite consensus disorder prediction 78 103 - -
Phco2g00702 325 SMART WRKY_cls 246 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco2g00702 325 MobiDBLite consensus disorder prediction 70 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00702 Phco-Chr2 7219768 7222315 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco2g00702 WRKY 8.7e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00702 2 7219768 7222315 Phco2g00702 2 7219768 7222315 ECH