Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00698 ATGTTTGAAGTACATCACCATTTTGTTCAACACCGTGACTTGAAAGTGAAAGATGACATGGCATTGTTCTTTGGTGAGCAGAATAAAGACAAAGAAATTGTTAGCAAAGAGGGTAAAGATATTGAAATGGAAGGGAGAGATGATGAGAAGAAGGAGGAAACCCTACCACCTGGATTTCGGTTTCACCCCACTGATGAAGAACTCATTTCTTACTACCTCACGAACAAGATTTCAGATTCTAATTTCACAGGAAAAGCAATAGCTGTTGTGGATCTCAACAAATGTGAGCCATGGGATCTTCCGGGGAAGGCGAAGATGGGGCAAAAAGAATGGTACTTCTTCAACCTAAGGGATCGTAAATATCCGACAGGTGTGAGAACGAATAGAGCAACGAAGACAGGGTACTGGAAAACCACTGGGAAAGACAAGGAGATCTTGAACAGTGTTACATCGGAGTTGGTTGGTCTGAAGAAGACTTTGGTTTTCTACAAAGGTAGGGCTCCCAGAGGAGAGAAAACCAACTGGGTCATGCATGAATATCGCATTCATTCAAAATCCACCTTCAAAATCGATAAGCAAGATGAATGGGTGGTTTGCCGGGTGTTCCGCAAGAGTGGTGGAGCAAGAAAGTTCCCATCAAATTCCAACCACACCAGAACACTGAATCCTTACAGTGTGGAAGTTGGCCCTAGCATTGTGCCACCCCCAATGATGCACCTGGGAGATCCTTCTGCTCATTTCAATTTTCCTTATGGATCAAGAAACTTCATGATGAACCCTTCAGAGGTAGCTGAAGTCACAAGGGTCTTGAGAGGTGCTGGATCCACAAGTGCCAATGTGATGAACCTGCCAATAATGCACCCCCATTTCAACAATCCACCACCACCACCACCAGCAGAAGCAGGAGGTTTCACCATTTCTGGCCTTAATTTGAACCTGGGAGGAGGAACAGTTTCTACTACTGCCACCACACAAACACAACCCTTTTTGAGGCCAATGATGCCACCACCACAGCCACTTTCTGCTCACACAGTGGCCCAACTGAACCATGATTTCAGTTCCAACATGGTGACACACACTGCTCTTGCTGCTGACAATGTAGGGTATGGTGCAGACATAGCCAATGGAAATTCTCACGGCAATAGGTACATGGGCATGGACCACTGCATGGATCTAGACAATTACTGGCCTTCCTACTAA 1200 0.4542 MFEVHHHFVQHRDLKVKDDMALFFGEQNKDKEIVSKEGKDIEMEGRDDEKKEETLPPGFRFHPTDEELISYYLTNKISDSNFTGKAIAVVDLNKCEPWDLPGKAKMGQKEWYFFNLRDRKYPTGVRTNRATKTGYWKTTGKDKEILNSVTSELVGLKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSTFKIDKQDEWVVCRVFRKSGGARKFPSNSNHTRTLNPYSVEVGPSIVPPPMMHLGDPSAHFNFPYGSRNFMMNPSEVAEVTRVLRGAGSTSANVMNLPIMHPHFNNPPPPPPAEAGGFTISGLNLNLGGGTVSTTATTQTQPFLRPMMPPPQPLSAHTVAQLNHDFSSNMVTHTALAADNVGYGADIANGNSHGNRYMGMDHCMDLDNYWPSY 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00698 399 FunFam NAC domain-containing protein 100-like 64 208 - -
Phco2g00698 399 Gene3D NAC domain 64 207 IPR036093 GO:0003677|GO:0006355
Phco2g00698 399 SUPERFAMILY NAC domain 52 204 IPR036093 GO:0003677|GO:0006355
Phco2g00698 399 Pfam No apical meristem (NAM) protein 56 182 IPR003441 GO:0003677|GO:0006355
Phco2g00698 399 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 52 273 - -
Phco2g00698 399 ProSiteProfiles NAC domain profile. 55 204 IPR003441 GO:0003677|GO:0006355
Phco2g00698 399 MobiDBLite consensus disorder prediction 37 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00698 Phco-Chr2 7158640 7165492 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco2g00698 NAM 1.7e-40 No_clan