Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00665 ATGGCTCCTCCCAGAGGTCGTGGTGGTGGAAGTTTCAGTGGTGGTGGTGGTAGTGGAGGTTTCAGGGGTGGTAGGGGTGACAGAGGTAGAGGAAGGGGCGGCGGAGGTAGAGGAGGAGACAGGGGTACGCCTTTTAAAGCCAGAGGTGGTGGGAGAGGAGGCAGGGGAGGTGGCCGTGGAGGAGGTAGAGGTGGTGGCCGTGGTGGAGGAATGAAGGGAGGGAGCAAGGTCGTGGTTCAACCACATAGACATGAGGGTATTTTTATTGCCAAGGGTAAAGAAGATGCCCTTGTCACTAAGAATCTTGTTCCTGGTGAAGCTGTTTACAATGAGAAAAGGATTACTGTTCAGAACGAAGATAGTTCCAAAGTTGAGTACAGAATTTGGAATCCTTTCCGCTCGAAGTTGGCTGCTGCTATCCTTGGTGGGGTTGATAACATATGGATTAAACCTGGTGCTAGAGTCCTTTACTTAGGAGCTGCTTCTGGCACAACTGTTTCTCATGTTTCTGATGTTGTTGGCCCAACAGGAGTTGTCTATGCAGTTGAATTTTCTCATAGAAGTGGACGTGATTTGGTCAATATGGCAAAGAAGCGTACTAATGTTATACCCATTATTGAAGATGCAAGACATCCAGCAAAGTACAGGATGTTAGTTGGTATGGTTGATGTCATATTTTCTGATGTTGCCCAGCCTGATCAGGCAAGGATTTTGGGGCTCAATGCTTCATATTATCTCAAAACGGGAGGTCATTTTGTTATTTCAATCAAGGCTAACTGCATAGACTCTACCGTTCCTGCCGAGGCAGTGTTTGAAAGCGAAGTGAACAAGTTGAAGGCAGATCAATTCAAGCCATTCGAGCAAGTCACCCTTGAACCATTTGAGAGGGACCATGCTTGTGTTGTTGGTGGATACAGAATGCCCAAGAAGAAGAAAGATACTGCGTAG 948 0.4715 MAPPRGRGGGSFSGGGGSGGFRGGRGDRGRGRGGGGRGGDRGTPFKARGGGRGGRGGGRGGGRGGGRGGGMKGGSKVVVQPHRHEGIFIAKGKEDALVTKNLVPGEAVYNEKRITVQNEDSSKVEYRIWNPFRSKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILGLNASYYLKTGGHFVISIKANCIDSTVPAEAVFESEVNKLKADQFKPFEQVTLEPFERDHACVVGGYRMPKKKKDTA 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00665 315 PRINTS Fibrillarin signature 232 261 IPR000692 GO:0003723|GO:0006364|GO:0008168
Phco2g00665 315 PRINTS Fibrillarin signature 177 194 IPR000692 GO:0003723|GO:0006364|GO:0008168
Phco2g00665 315 PRINTS Fibrillarin signature 97 116 IPR000692 GO:0003723|GO:0006364|GO:0008168
Phco2g00665 315 PRINTS Fibrillarin signature 152 173 IPR000692 GO:0003723|GO:0006364|GO:0008168
Phco2g00665 315 PRINTS Fibrillarin signature 202 231 IPR000692 GO:0003723|GO:0006364|GO:0008168
Phco2g00665 315 PRINTS Fibrillarin signature 284 305 IPR000692 GO:0003723|GO:0006364|GO:0008168
Phco2g00665 315 PRINTS Fibrillarin signature 125 144 IPR000692 GO:0003723|GO:0006364|GO:0008168
Phco2g00665 315 PANTHER RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN 9 311 - -
Phco2g00665 315 FunFam Fibrillarin like 1 130 307 - -
Phco2g00665 315 SMART Fibrillarin_2 79 307 IPR000692 GO:0003723|GO:0006364|GO:0008168
Phco2g00665 315 Gene3D Vaccinia Virus protein VP39 130 307 IPR029063 -
Phco2g00665 315 FunFam Fibrillarin like 1 74 129 - -
Phco2g00665 315 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 303 IPR029063 -
Phco2g00665 315 PIRSF Nop17p 30 309 IPR000692 GO:0003723|GO:0006364|GO:0008168
Phco2g00665 315 Hamap Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase [flpA]. 93 306 IPR000692 GO:0003723|GO:0006364|GO:0008168
Phco2g00665 315 MobiDBLite consensus disorder prediction 1 77 - -
Phco2g00665 315 Pfam Fibrillarin 79 306 IPR000692 GO:0003723|GO:0006364|GO:0008168
Phco2g00665 315 ProSitePatterns Fibrillarin signature. 177 191 IPR020813 GO:0003723|GO:0006364|GO:0008168
Phco2g00665 315 Gene3D Phosphorylase Kinase; domain 1 74 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00665 Phco-Chr2 6668452 6671338 Dispersed