Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00657 ATGGAATTTGAGAAAACGTTAGGTTTCGGGCAAGAAGATTGTTGTTGTTATTGGACGATCTACTTGGGGTGCAATAGGTTGAATTATCATAGTTCAGTCAGGAAATGGAGCCTCGATTCAAACTTTGGAGTAACTAATGATTCGGTTGAGTTCAAAATGAACTGTGCCTTGAGTAGTTCTTCCTTTCCCCTGGTCCTTGTTGGAGTGTTTATTAATGTTGTCCAGTATAGTTGGATTTGGTATTGGGAGAACTTCAAGGATTCAAGTGACCATTCAATGCTATTGGTTTCTGTTTACTGCTGGAGGCTGTCAAGGACCCCAGTGCTACCTTGTATTATGGATGAGCAATTCATACTTAGAGTTCCACCGAATGTGGCAGAGCGGATAGAGCGCCTTTTGAATGAAACTGATCCTTCTTCATCTGAAGACAAGTCATTAGATTTGTCATTTAATGAGGATGGAAGAAGTGGTACGTTTATGATTGGGAATGAACACTTCCCAGCTTCTTTATTGGACCTTCCTTGTGTTGTTGAATCCTATAAGACATATGATGATAACTCTTTGATTAAGGCTGCTGATATTGGTCAGATGATTATGGTTCGGGAATCTGGTGATGCTGCTCCAGATGTAATTGAGTACAGGCATGGTCTCACCCCTCCCATGAGAGATGCTCGCAAGCGTAGATTTCGCAGGGAGCCTGATCTTAATCCTGAGCTTGTATCCCGTGTTGAGAAAGATCTCCTCAAAATCATGGCTGGAGGAACTGCCGAAAATCTTGATATCCTTAAACAAGCCGCGGAACAAGAAGTGGAGGAGAATGCTCGAGGTGCTAATAAAAAACCTGCACCTAAGCCTGCACCAAAACATGATGTTCCAGAGAATCTTACAAATGCAGGGGAGCCGGACAGGAGTGATTCTGAGGAATCTGATGACTCATTGCTACAACAACTGGGTGCATTTGTTGGGGTAAAGATTGGCACTGATGTTACTGATCTTCCATCTGCTTCAAATATGGTTGCTATTCTGAAAGCACATCAAATTACACATGTGCGTCTGTATGATGCCAATGAGCACATGCTACAAGCCCTTTTGAAAACTGGCATTGAAGTAATTGTTGGAGTCACAGATGAAGAGATACTAGGCATTGGAGAATCTGCATCAGTTGCTGCAGCATGGATTAGTAAGAATGTGGCTGCATACATGCCATCTACTAACATCACAGCAATATCAGTAGGTAGTGAGGTTCTCACCTCAGTCCCAAAAGTTGCACCTGTTCTTGTTCCTGCCATGAACCATCTGCACAAAGCACTTGTTGCTTCAAACCTTAACTTTAGGGTTAAGATTTCAACACCGCAATCCATGGATATAATTTCCAGGCCTTTTCCTCCTTCTACGGCCACCTTTAACTCCTCATGGAACTCCACAATCTACCAGCTCCTTCAGTTTTTGCAGAACACAAATTCCTCTTACATGTTAAATGCCTACCCTTATTATGGATACACCAAAGGAGATGGCATTTTCCCTATTGAATATGCTCTATTCAGACCACTTTCTCCAGTGAAGCAAATTGTTGACCCAAACACACTATTCCATTACAATAGCATGTTTGAGGCTATGGTGGATGCTACCTATTATGCCATAGAAGCCTTCAATTTCAATAATATACCTATTGTTGTCACAGAAACTGGTTGGCCTAGTTTTGGTGCAGTAAATGAACCAGATGCTACTGAAAAGAATGCTGAGACCTACAATAATAATATAATTTTGAGAGTACTCAACGGTTCAGGACCCCCAAGTCAGCCAAAGATAGCCCTTAATACCAACCTATATGAGTTATTTAATGAGGACAAGAGAAAAGGGCCTATATCAGAAAAGAATTGGGGTGTTTTTTATGCTAATGGAAGTAGTGTTTATCCCTTGAGTTTTAGTTCTTCCAACCTGAGAAATGGAAATTCCCTAGGATCATTTTGTGTGGCTAAAGATGATTCAGACACTGACAAATTGCAAGCTGGCTTAAGCTGGGCTTGTGGACAAGGCCAAGCTAACTGTGTAGCTATCCAACCAGGGAGACCATGCTATTCCCCAAATAACGTCAAAAGCCATGCCTCTTATGCTTATAATGATTATTATCAAAAAATGCATAATGCTGGTGGCACATGTGACTTTGATGGTACAGCTACAACAACTACTGAAGATCCTAGTAAGTCCATGATCCTTCTTATTTTCAATCTTCTGGTTATGGGTCCTGCATATATGCGGGAAGTGCTAACTCAAGCATTTGTGGAAGGAGTTCATCTTCTACAGCAATTGGACTTGGACCTGCCTAGCCGCTACGTGCCACTTTGTTGGTGTATTTGGGATCATTCTTGGTAG 2373 0.4172 MEFEKTLGFGQEDCCCYWTIYLGCNRLNYHSSVRKWSLDSNFGVTNDSVEFKMNCALSSSSFPLVLVGVFINVVQYSWIWYWENFKDSSDHSMLLVSVYCWRLSRTPVLPCIMDEQFILRVPPNVAERIERLLNETDPSSSEDKSLDLSFNEDGRSGTFMIGNEHFPASLLDLPCVVESYKTYDDNSLIKAADIGQMIMVRESGDAAPDVIEYRHGLTPPMRDARKRRFRREPDLNPELVSRVEKDLLKIMAGGTAENLDILKQAAEQEVEENARGANKKPAPKPAPKHDVPENLTNAGEPDRSDSEESDDSLLQQLGAFVGVKIGTDVTDLPSASNMVAILKAHQITHVRLYDANEHMLQALLKTGIEVIVGVTDEEILGIGESASVAAAWISKNVAAYMPSTNITAISVGSEVLTSVPKVAPVLVPAMNHLHKALVASNLNFRVKISTPQSMDIISRPFPPSTATFNSSWNSTIYQLLQFLQNTNSSYMLNAYPYYGYTKGDGIFPIEYALFRPLSPVKQIVDPNTLFHYNSMFEAMVDATYYAIEAFNFNNIPIVVTETGWPSFGAVNEPDATEKNAETYNNNIILRVLNGSGPPSQPKIALNTNLYELFNEDKRKGPISEKNWGVFYANGSSVYPLSFSSSNLRNGNSLGSFCVAKDDSDTDKLQAGLSWACGQGQANCVAIQPGRPCYSPNNVKSHASYAYNDYYQKMHNAGGTCDFDGTATTTTEDPSKSMILLIFNLLVMGPAYMREVLTQAFVEGVHLLQQLDLDLPSRYVPLCWCIWDHSW 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00657 790 SUPERFAMILY (Trans)glycosidases 322 641 IPR017853 -
Phco2g00657 790 Gene3D - 651 739 - -
Phco2g00657 790 MobiDBLite consensus disorder prediction 268 311 - -
Phco2g00657 790 SMART TAFII55_N_2 113 258 IPR006751 GO:0005669|GO:0006367
Phco2g00657 790 ProSitePatterns Glycosyl hydrolases family 17 signature. 555 568 IPR000490 GO:0004553|GO:0005975
Phco2g00657 790 SMART X8_cls 655 736 IPR012946 -
Phco2g00657 790 Pfam Glycosyl hydrolases family 17 321 642 IPR000490 GO:0004553|GO:0005975
Phco2g00657 790 FunFam Glucan endo-1,3-beta-glucosidase 4 651 742 - -
Phco2g00657 790 CDD TAF7 114 257 IPR006751 GO:0005669|GO:0006367
Phco2g00657 790 MobiDBLite consensus disorder prediction 268 287 - -
Phco2g00657 790 FunFam Glucan endo-1,3-beta-glucosidase 3 320 645 - -
Phco2g00657 790 Gene3D Glycosidases 320 649 - -
Phco2g00657 790 Pfam X8 domain 656 727 IPR012946 -
Phco2g00657 790 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 321 729 IPR044965 GO:0004553|GO:0005975
Phco2g00657 790 Pfam TAFII55 protein conserved region 114 251 IPR006751 GO:0005669|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00657 Phco-Chr2 6596352 6605320 Wgd