Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco2g00652 | ATGGATGAGCAATTCATACTTAGAGTTCCACCGAATGTGGCAGAGCGGATAGAGCGCCTTTTGAATGAAACTGATCCTTCTTCATCTGAAGACAAGTTATTAGATTTGACATTTAATGAAGATGGAAGAAGTGGTACGTTTATGATTGGGAATGAACAATTCCCAGCTTCTCTATTGGACCTTCCTTGTGTTGTTGAATCCTACAAGACATATGATGATAACTCTTTGATTAAGGCTGCTGATATTGGTCAGATGATTATGGTTCGGGAATCTGGTGATGCTGCTCCAGATGTAATTGAGTACAGACATGGCCTCACCCCTCCCATGAGAGATGCTCGCAAGCGTAGATTCCGCAGGGAGCCTGATCTTAATCCTGAGCTTGTATCCCGTGTTGAGAAAGATCTCCTCAAAATCATGGCCGGAGGAACAGCCGAAAATCTTGATATCCTTAAACAAGCCGCTGAACAGGAAGTGGAGGAGAATGCCCGAGGTGCTAATAAAAAACCTGCACCTAAGCCTGCACCAAAACATGATGTTCCAGAGAATCTTACAAATGCAGGGGAGCCTGACAGGAGCGATTCTGAGGAATCTGATGACTCAGTATGA | 606 | 0.4422 | MDEQFILRVPPNVAERIERLLNETDPSSSEDKLLDLTFNEDGRSGTFMIGNEQFPASLLDLPCVVESYKTYDDNSLIKAADIGQMIMVRESGDAAPDVIEYRHGLTPPMRDARKRRFRREPDLNPELVSRVEKDLLKIMAGGTAENLDILKQAAEQEVEENARGANKKPAPKPAPKHDVPENLTNAGEPDRSDSEESDDSV | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco2g00652 | 201 | MobiDBLite | consensus disorder prediction | 155 | 201 | - | - | |
| Phco2g00652 | 201 | CDD | TAF7 | 2 | 145 | IPR006751 | GO:0005669|GO:0006367 | |
| Phco2g00652 | 201 | MobiDBLite | consensus disorder prediction | 155 | 175 | - | - | |
| Phco2g00652 | 201 | SMART | TAFII55_N_2 | 1 | 146 | IPR006751 | GO:0005669|GO:0006367 | |
| Phco2g00652 | 201 | Pfam | TAFII55 protein conserved region | 2 | 139 | IPR006751 | GO:0005669|GO:0006367 | |
| Phco2g00652 | 201 | PANTHER | TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED | 1 | 195 | IPR037817 | GO:0005669 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco2g00652 | Phco-Chr2 | 6567341 | 6568458 | Proximal |