Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00642 ATGGAGCGGCCTGGGAGCACCAATGGCAGTCAGCATGTGATAGAAATAGCTGGGAGTTCCGATGCTTCCACATCATCTGCGACACATCATGATAGGAGTTTTAATGGCACAGATGTGACGCTGCATGAAGAAAGAATTACCGGTGCAAGGACGCCTCTATCTCAGCCTTCAGGTTCAGTCACTAGTTTATCTAATGGGTCTAATAGTCGGAATTCCTCATTCATGAGACGCGGGGATACTCGTAGGAGTAGGAGTCCTGTGCATTCGGGTTTATGGATATCAATTGAGCTGGTCCTCTTAGTGAGCCAGATTGTTGCATCTGTCGTTGTTTTGTCTTTGTCAAGGCATGAACATCCGCGTACTCCATTGTTTCAATGGATCATAGGTTATGCTTCTGGTTGTTTTGCTACCCTCCCTCTGCTTTGTTGGCGGTATTATCATCATAACCATATGAGAGAGCAAGATTCATCTCAATCAAGGCAAACATCTCCTCGGATTAATGATCCTTCAGGAACACTCCTTTTCAGTTCCAGGACTAATGGTGGAGAAGAGGGTCAGGCTGTTGCATCCTCCAGAAGCAATCAAGCTTCTGTGTTGATGAATAGAAGAATGAAGACTCTAGTGGAATACTTCAAAATATCTTTAGATTGCTTTTTTGCTGTATGGTTTGTTGTTGGAAATGTATGGATCTTTGGGGGACGTTCTTCTGCTGATGATGCTCCTAACTTGTACAGGTTATGTATAGTGTTTCTTGCATTTAGCTGTATTGGTTATGCTATGCCCTTCATTCTCTGTTCAACAATCTGCTGTTGTCTCCCATGTATAATTTCCATTCTTGGGGTTAGAGAGGATATGACTCAAAACAGAGGGGCAACTTCTGAATCCATTAATGCTTTGCCAACGTACAAGTTCAAGATGAAGAAAAATAAAAAAAATGGAGAAGGCAACTCAACTGAAGGTGGAGTTGTGGCTGCAGGAACTGAAAAAGAGCGAGTAATATCTGGTGAAGATGCGGTATGCTGCATCTGCCTGGCAAAGTATGAAAATAACGATGAGTTGAGAGAATTGCCTTGTTCTCATCTTTTCCACAAAGATTGTGTGGATAAATGGTTGAAGATAAATTCATTATGCCCTCTTTGCAAGAGTGATGTTGGTGAGAACTTAACAGGATTGGTCTCAGGAGAAGATGCCATCCAGCATGGGAGTGAGAGCAGGATTGAGAATGACCTCGCGAGTACCTCAGTTTAG 1248 0.4295 MERPGSTNGSQHVIEIAGSSDASTSSATHHDRSFNGTDVTLHEERITGARTPLSQPSGSVTSLSNGSNSRNSSFMRRGDTRRSRSPVHSGLWISIELVLLVSQIVASVVVLSLSRHEHPRTPLFQWIIGYASGCFATLPLLCWRYYHHNHMREQDSSQSRQTSPRINDPSGTLLFSSRTNGGEEGQAVASSRSNQASVLMNRRMKTLVEYFKISLDCFFAVWFVVGNVWIFGGRSSADDAPNLYRLCIVFLAFSCIGYAMPFILCSTICCCLPCIISILGVREDMTQNRGATSESINALPTYKFKMKKNKKNGEGNSTEGGVVAAGTEKERVISGEDAVCCICLAKYENNDELRELPCSHLFHKDCVDKWLKINSLCPLCKSDVGENLTGLVSGEDAIQHGSESRIENDLASTSV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00642 415 MobiDBLite consensus disorder prediction 50 74 - -
Phco2g00642 415 ProSiteProfiles Zinc finger RING-type profile. 340 381 IPR001841 -
Phco2g00642 415 Pfam Ring finger domain 340 381 IPR001841 -
Phco2g00642 415 SUPERFAMILY RING/U-box 332 387 - -
Phco2g00642 415 MobiDBLite consensus disorder prediction 16 34 - -
Phco2g00642 415 SMART ringv_2 339 381 IPR011016 GO:0008270
Phco2g00642 415 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 323 387 IPR013083 -
Phco2g00642 415 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 1 384 - -
Phco2g00642 415 SMART ring_2 340 380 IPR001841 -
Phco2g00642 415 MobiDBLite consensus disorder prediction 16 85 - -
Phco2g00642 415 FunFam E3 ubiquitin-protein ligase 323 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00642 Phco-Chr2 6411994 6418317 Dispersed/Transposed