Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco2g00637 | ATGCTCTCTCGTTCTCTCAAATCCCCTCACTCACTCTTCTCCCTCCGTTCATTTCTCGTTCCAAACCCAATTCCTAACCTAAACCCTTCAATCCGAACCTCCCCACACCGTCTCTTCTCCTCTTCATGGATATCCGAACCGGGAAATCCAATCATCCAATGGCCATCACTACCCACACCAAACCCTTCTCCCAATCCCAATCCCAAACCTACACCCGACCCTACCTCTCCAAACCTAAACGCTTTCTCCCTCATTTCCAACCTCTTCACGGACCCTTCTGTCTCACCCGGTCCGGTCCTCCACGCCAAACTCGACCGCTCTGCCATCGAACCGGACCCGGCTCTCCTTCTCGCCCTCTTCGACCGCTTCGGCTCGTCCCCCAAGCTCCTACACTCGCTCTTCCTCTGGGCCCAGACCCGACCCGGCTTCAGGCCCGGCCCGAAGCTGTTTGACGCCGTTGTCAATGCTCTCGCGAAGGCAAGGGAGTTTGACGCCGCGTGGAAACTTGTTCTCGATCACGTTGATGGAGATGGGGAACAAGAAAACGAAAGCTTGGTTTCTGTTGGGACCTTTGCCATCATGATTCGACGCTATGCGCGTGCAGGTATGTCCAAACTTGCAATTAGAACTTATGAATTTGCTAAAAATAACAAGTCAATTGTGGATTCTGGCTCAGAAATGAGTTTATTTGAGATATTGATGGATTCACTTTGTAAAGAAGGGTCTGTGAGGGAAGCCTCAGAGTATTTCCTTTGGAGAAAGGAGTTGGACTTAAGTTGGGTTCCTTCTATTCGGGTTTATAACATAATGTTGAATGGATGGTTTCGATCGAGGAAACTCAAACAGGGCGAGAGACTTTGGGCAGAGATGAAGAAAGAGAATGTGAGACCAAGTGTTGTGACATATGGTACCCTTGTGGAAGGATACTGTCGGATGCGCCGTGTCGAGAAAGCACTTGAAATGGTTGGTGATATGACCAAGGAAGGAATTGCACCAAATGTAATTGTATACAACCCAATAATTGATGCTCTAGCAGAAGCTGGAAGATTTAAAGAGGCTTTGGGTATGTTGGAACGATTTCATGTTTTGGAAATTGGCCCAACTGATTCAACATACAATTCTCTCATAAAAGGGTTTTGTAAGGCAGCAGATCTTGCAGGTGCTAGTAAGATTCTTAAAATGATGATAAGTAGGGGTTTCATCCCAAGTCCCACTACCTATAACTACTTTTTTCGGTATTTTTCAAGATGTGGAAAAATTGAGGAGGGGATGAACCTGTATAGAAAGATGATTGCGTCTGGTTATACCCCAGATCGGTTAACATACCATCTTTTGGTGAAGATGTTATGTGAAGAGGGGAAGTTAGACTTGGCAGTTCAAGTTAGCAAGGAAATGAGGCATAATGGATATGACATGGACTTGGCTACCAGTACCATGTTAATTCATTTGCTTTGCAAAATGCATAGGTTGGAAGAGGCTTTTGCTGAATTTGAGGACATGATAAGAAGGGGTATAGTTCCTCAGTATCTCACTTTCCAGGGAATGAAAGCAGAGTTGAAGAGACAAGGTATGACTGAAATGGCTCAAAAGCTTTGTAAGTTGATGTCTTCTGTTCCCTATTCTGGCAACTTGCCAAATACTTATGGTGGAGACAGAGAAGATGCTCTTACACGAAGAAAATCTATAATTCGGAAAGCCAAAGCATTTTCTGATATGCTGAAGGACTGTAAGGATCCAAGTGAACTTCGTCAGTGTAAAAATTCATCAGAAAATGCTGTCTCAAGCGCAAATTCTATGATAGAGGATATTGAGGGAAAATGA | 1821 | 0.4487 | MLSRSLKSPHSLFSLRSFLVPNPIPNLNPSIRTSPHRLFSSSWISEPGNPIIQWPSLPTPNPSPNPNPKPTPDPTSPNLNAFSLISNLFTDPSVSPGPVLHAKLDRSAIEPDPALLLALFDRFGSSPKLLHSLFLWAQTRPGFRPGPKLFDAVVNALAKAREFDAAWKLVLDHVDGDGEQENESLVSVGTFAIMIRRYARAGMSKLAIRTYEFAKNNKSIVDSGSEMSLFEILMDSLCKEGSVREASEYFLWRKELDLSWVPSIRVYNIMLNGWFRSRKLKQGERLWAEMKKENVRPSVVTYGTLVEGYCRMRRVEKALEMVGDMTKEGIAPNVIVYNPIIDALAEAGRFKEALGMLERFHVLEIGPTDSTYNSLIKGFCKAADLAGASKILKMMISRGFIPSPTTYNYFFRYFSRCGKIEEGMNLYRKMIASGYTPDRLTYHLLVKMLCEEGKLDLAVQVSKEMRHNGYDMDLATSTMLIHLLCKMHRLEEAFAEFEDMIRRGIVPQYLTFQGMKAELKRQGMTEMAQKLCKLMSSVPYSGNLPNTYGGDREDALTRRKSIIRKAKAFSDMLKDCKDPSELRQCKNSSENAVSSANSMIEDIEGK | 606 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco2g00637 | 606 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL | 54 | 446 | - | - | |
| Phco2g00637 | 606 | MobiDBLite | consensus disorder prediction | 580 | 606 | - | - | |
| Phco2g00637 | 606 | NCBIfam | pentatricopeptide repeat | 441 | 473 | IPR002885 | - | |
| Phco2g00637 | 606 | NCBIfam | pentatricopeptide repeat | 406 | 438 | IPR002885 | - | |
| Phco2g00637 | 606 | NCBIfam | pentatricopeptide repeat | 266 | 298 | IPR002885 | - | |
| Phco2g00637 | 606 | NCBIfam | pentatricopeptide repeat | 335 | 368 | IPR002885 | - | |
| Phco2g00637 | 606 | NCBIfam | pentatricopeptide repeat | 478 | 507 | IPR002885 | - | |
| Phco2g00637 | 606 | NCBIfam | pentatricopeptide repeat | 300 | 334 | IPR002885 | - | |
| Phco2g00637 | 606 | NCBIfam | pentatricopeptide repeat | 371 | 403 | IPR002885 | - | |
| Phco2g00637 | 606 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 473 | 507 | IPR002885 | - | |
| Phco2g00637 | 606 | Pfam | PPR repeat | 232 | 250 | IPR002885 | - | |
| Phco2g00637 | 606 | Pfam | PPR repeat | 476 | 505 | IPR002885 | - | |
| Phco2g00637 | 606 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 438 | 472 | IPR002885 | - | |
| Phco2g00637 | 606 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 333 | 367 | IPR002885 | - | |
| Phco2g00637 | 606 | MobiDBLite | consensus disorder prediction | 54 | 75 | - | - | |
| Phco2g00637 | 606 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 263 | 297 | IPR002885 | - | |
| Phco2g00637 | 606 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 403 | 437 | IPR002885 | - | |
| Phco2g00637 | 606 | MobiDBLite | consensus disorder prediction | 54 | 77 | - | - | |
| Phco2g00637 | 606 | Pfam | PPR repeat family | 262 | 311 | IPR002885 | - | |
| Phco2g00637 | 606 | Pfam | PPR repeat family | 405 | 450 | IPR002885 | - | |
| Phco2g00637 | 606 | Pfam | PPR repeat family | 332 | 381 | IPR002885 | - | |
| Phco2g00637 | 606 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 368 | 402 | IPR002885 | - | |
| Phco2g00637 | 606 | Gene3D | Tetratricopeptide repeat domain | 326 | 395 | IPR011990 | GO:0005515 | |
| Phco2g00637 | 606 | Gene3D | Tetratricopeptide repeat domain | 467 | 538 | IPR011990 | GO:0005515 | |
| Phco2g00637 | 606 | Gene3D | Tetratricopeptide repeat domain | 396 | 466 | IPR011990 | GO:0005515 | |
| Phco2g00637 | 606 | Gene3D | Tetratricopeptide repeat domain | 253 | 325 | IPR011990 | GO:0005515 | |
| Phco2g00637 | 606 | Gene3D | Tetratricopeptide repeat domain | 99 | 252 | IPR011990 | GO:0005515 | |
| Phco2g00637 | 606 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 298 | 332 | IPR002885 | - |