Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phco2g00632 | ATGTCTCAGACTAACTGGGAAGCTGATAAGATGTTAGATGTTTACATCCATGATTACCTAGTGAAGAGGGATTTGAAGGCCTCAGCTCAGGCTTTTCAAGCTGAAGGGAAAGTGTCGTCGGACCCTGTTGCTATTGATGCACCCGGAGGATTTCTGTTCGAGTGGTGGTCTGTTTTCTGGGACATATTTATTTCCAGGACCAATGAGAAGCACTCTGAGGTTGCTGCATCTTATATCGAGACACAATTTATGAAGGCTAGAGAGCAACAACAGCAACAGCAACAGCAGCAGCAGCCACAACCTCAGCAGTCGCAACATCAGCAGCAGCAGCAGCAACAACAACACATACAGATGCAACAAATCCTGTTACAGAGGGCTCAGCAACAACAACAGCAGCAACAACAGCAGCAGCAGCAACCACAACAGCAACAGCAACAGCAACAGCAGCCACAACATCAGCAGCCACCACCTCAGCAGCAGCAGGGTAGGGAAAGGACTCATCTCTTAAATGGTGGTACCAATGGGTTAGTTGGAAACCCTAGCACTGCAAATGCACTGGCAACAAAGATGTACGAGGAAAGGTTAAAACTTCCCCTTCAAAGGGACTCTTTGGAAGATGCAGCAATGAAGCAAAGATTTGGAGGCCAACTCTTGGACCCAAATCATGCCTCAATATTGAAGTCATCTGCAGCTACCGGCCAGCCGTCAGGCCAAGTTTTGCATGGTGCCGCTGGTGCAATGTCTCCACAAGTTCAAGCACGTAGTCAGCAATTACCAGGGTCTACTCCGGATATAAAGAGTGAGATAAATCCTGTTTTAAATCCCAGAGCTGCAGGTCCTGAAGGATCATTGATAGCAATGCCTGGTTCAAATCAAGGTAGCAACAATTTAACTCTAAAAGGGTGGCCTCTAACGGGGTTGGAGCAACTACGTTCTGGTATACTTCAGCAACAGAAACCACCTTTCATACAGTCTCCTCAAACATTTCATCAACTTCCAATGTTGACACCACAACATCAGCAACAGCTAATTCTGGCACAGCAAAATTTGGCATCACCATCTGGCAGTGATGATAATAGAAGACTCAGAATGCTGCTGAATAACAGGAATATGGGTGTAGCTAAGGATGGTCTTTCAAACCCTGTTGGTGATGTTGTATCAAATGTTGGATCACCTCTTCAAGCAGGTGGCCCCGCTTTCCAGCGTAGTGATACAGACATGCTAATGAAGTTGAAACTGGCACACTTACACCAACATCAACAACAGCAGAATGCCAATCCACAACAGCAGCAACTGCAACAGCATACTCTATCAAATCAGCAATCTCAGTCTTCAAATCATAACATGCATCAGCAGGATAAAATGGGGGGAGGTGGTGGCAGTGTCAATTTAGATGGTAGCATGTCAAACTCCTTTAGAGGCAACGATCAGGTTTCCAAAAGCCAGACTGGGAGAAAGAGAAAGCAGCCTGCATCTTCTGGTCCTGCCAATAGTTCTGGAACAGCTAATACAGCTGGCCCATCTCCAAGTTCAGCACCCTCGACTCCCTCGACACATACACCCAGTGATGTGATGTCAATGCCTGCTTTGCCTCATAGTGGTAGTTCTTCAAAGCCATTAATAATGTTTGGCCCTGATGGTGCGGGAACTCTTACATCACCTTCAAACCAGTTGTGGGATGATAAGGATCTTGAATTGCAGGCTGATGTGGATCGTTTTGTGGAGGATGGATCTCTTGACGATAATGTTGAGTCTTTTTTATCCCATGAGGATAATGACCCAAGAGATACTGTTGGTCGTTGTATGGATGTAAGCAAAGGTTTCACATTTTCTGAAATAAATTCTGTACCTGCAAGCACTAACAAAGTTGTCTGTTGCCATTTCTCCTCTGATGGGAAATTGCTTGCTAGTGGTGGCCATGACAAAAAGGCTGTTTTATGGTTCACAGATTCTCTAAAACAAAAGGCCACTCTTGAAGAGCATTCTTCTTTAATCACTGATGTCCGTTTCAGTCCAAGCATGCCTCGCCTTGCTACATCTTCATATGACAGAACTGTCAGGGTGTGGGATGTTGATAATCCTGGATATACGCTTCGTACTTTTACTGGTCATTCTTCATCTGTTATGTCACTAGATTTTCACCCTAATAAAGAGGATCTTATTTGCTCTTGTGATGTTGATGGTGAGATACGATATTGGAGCATTACCAATGGCAGTTGTGCTAGAGTCTCAAAGGGTGGCACTGCTCAGATGAGATTTCAACCTCGTCTAGGGAGGTACCTAGCTGCAGCTGCTGAGAATGTTGTTTCAATATTTGATGTGGAAACACAAGCATGTCGATATTCATTAAAGGGACATACAAAATCAATACATTCTGTGTGTTGGGATCCTTCTGGGGAGTTCCTGGCATCTGTCAGTGAGGACTCTGTCAGGGTTTGGACTCTTGGATCAGGGAGTGAAGGGGAGTGTGTTCACGAGCTTAGCTGCAATGGCAATAAGTTTCACTCATGTGTTTTTCATCCAACATTTTCTTCGCTGTTGGTAGTTGGTTGTTACGAGTCATTGGAGCTCTGGAACATGAGTGAGAACAAGACAATGACTCTATCCGCTCATGAAGGTCTTATTGCTGCATTGGCGGTTTCTACTGTAAATGGTTTGGTTGCTTCAGCCAGTCATGACAAGTTTGTGAAGCTCTGGAAGTGA | 2703 | 0.4495 | MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFISRTNEKHSEVAASYIETQFMKAREQQQQQQQQQQPQPQQSQHQQQQQQQQHIQMQQILLQRAQQQQQQQQQQQQQPQQQQQQQQQPQHQQPPPQQQQGRERTHLLNGGTNGLVGNPSTANALATKMYEERLKLPLQRDSLEDAAMKQRFGGQLLDPNHASILKSSAATGQPSGQVLHGAAGAMSPQVQARSQQLPGSTPDIKSEINPVLNPRAAGPEGSLIAMPGSNQGSNNLTLKGWPLTGLEQLRSGILQQQKPPFIQSPQTFHQLPMLTPQHQQQLILAQQNLASPSGSDDNRRLRMLLNNRNMGVAKDGLSNPVGDVVSNVGSPLQAGGPAFQRSDTDMLMKLKLAHLHQHQQQQNANPQQQQLQQHTLSNQQSQSSNHNMHQQDKMGGGGGSVNLDGSMSNSFRGNDQVSKSQTGRKRKQPASSGPANSSGTANTAGPSPSSAPSTPSTHTPSDVMSMPALPHSGSSSKPLIMFGPDGAGTLTSPSNQLWDDKDLELQADVDRFVEDGSLDDNVESFLSHEDNDPRDTVGRCMDVSKGFTFSEINSVPASTNKVVCCHFSSDGKLLASGGHDKKAVLWFTDSLKQKATLEEHSSLITDVRFSPSMPRLATSSYDRTVRVWDVDNPGYTLRTFTGHSSSVMSLDFHPNKEDLICSCDVDGEIRYWSITNGSCARVSKGGTAQMRFQPRLGRYLAAAAENVVSIFDVETQACRYSLKGHTKSIHSVCWDPSGEFLASVSEDSVRVWTLGSGSEGECVHELSCNGNKFHSCVFHPTFSSLLVVGCYESLELWNMSENKTMTLSAHEGLIAALAVSTVNGLVASASHDKFVKLWK | 900 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phco2g00632 | 900 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 616 | 647 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | MobiDBLite | consensus disorder prediction | 231 | 292 | - | - | |
Phco2g00632 | 900 | Pfam | WD domain, G-beta repeat | 621 | 647 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | Pfam | WD domain, G-beta repeat | 779 | 813 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | Pfam | WD domain, G-beta repeat | 655 | 690 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | Pfam | WD domain, G-beta repeat | 863 | 900 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | Pfam | WD domain, G-beta repeat | 697 | 734 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | MobiDBLite | consensus disorder prediction | 141 | 181 | - | - | |
Phco2g00632 | 900 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 868 | 900 | - | - | |
Phco2g00632 | 900 | MobiDBLite | consensus disorder prediction | 249 | 268 | - | - | |
Phco2g00632 | 900 | MobiDBLite | consensus disorder prediction | 463 | 533 | - | - | |
Phco2g00632 | 900 | PANTHER | TRANSCRIPTION ACTIVATOR MSS11 | 2 | 900 | - | - | |
Phco2g00632 | 900 | SMART | WD40_4 | 861 | 900 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | SMART | WD40_4 | 776 | 814 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | SMART | WD40_4 | 609 | 648 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | SMART | WD40_4 | 737 | 773 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | SMART | WD40_4 | 820 | 859 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | SMART | WD40_4 | 694 | 734 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | SMART | WD40_4 | 651 | 690 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 783 | 823 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | MobiDBLite | consensus disorder prediction | 416 | 540 | - | - | |
Phco2g00632 | 900 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 701 | 743 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 868 | 900 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | Gene3D | - | 593 | 750 | IPR015943 | GO:0005515 | |
Phco2g00632 | 900 | FunFam | Transcriptional corepressor LEUNIG | 744 | 900 | - | - | |
Phco2g00632 | 900 | Pfam | LisH | 10 | 36 | IPR006594 | GO:0005515 | |
Phco2g00632 | 900 | Gene3D | - | 751 | 900 | IPR015943 | GO:0005515 | |
Phco2g00632 | 900 | MobiDBLite | consensus disorder prediction | 89 | 111 | - | - | |
Phco2g00632 | 900 | SMART | Lish | 8 | 40 | IPR006594 | GO:0005515 | |
Phco2g00632 | 900 | MobiDBLite | consensus disorder prediction | 416 | 452 | - | - | |
Phco2g00632 | 900 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 658 | 693 | IPR001680 | GO:0005515 | |
Phco2g00632 | 900 | CDD | WD40 | 620 | 900 | - | - | |
Phco2g00632 | 900 | Coils | Coil | 116 | 139 | - | - | |
Phco2g00632 | 900 | ProSiteProfiles | LIS1 homology (LisH) motif profile. | 8 | 40 | IPR006594 | GO:0005515 | |
Phco2g00632 | 900 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 677 | 691 | IPR019775 | - | |
Phco2g00632 | 900 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 658 | 693 | - | - | |
Phco2g00632 | 900 | SUPERFAMILY | WD40 repeat-like | 612 | 900 | IPR036322 | GO:0005515 | |
Phco2g00632 | 900 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 701 | 739 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phco2g00632 | Phco-Chr2 | 6288707 | 6302373 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | LUG | Phco2g00632 | WD40 | 0.081 | CL0186 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phco2g00632 | 2 | 6288707 | 6302373 | Phco7g00794 | 7 | 6177449 | 6192346 | PCT |