Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00612 ATGGATGTCTCCATCGATGGGGATCCGGTTGAAAGGATGGTTTTTGAGCTTTTCTATAATGTTGCTCCGAAGACTGCCGAAAATTTCCGTGCATTGTGCACAGGAGAAAGAGGAGTCGGTCCAAGTACTGGAAAGTCGCTGCACTACAAGGGTTCTTTCTTTCATCGAATTGTAAAAGGCTCCATTGCCCGGGGTGGAGATTTTGTAAACCGGAATGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAATCACCTAGGCTAAAGCATGATGCTCCAGGTCTTCTTTCCATGCCAGTTGCTGATCGTGACAGTCTTGGTTCTCATTTTATCATCACTTTTAAATCTGATCCACATCTTGATAGGAAACATGTAATCTTTGGCAAGCTTGTGCAAGGGCATAATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGATTTCCAAGCGTAACTGTTAAAATAATTAATTGTGGTGAACATAATGCGGATGGAAAGAAGATTAATAAGTCAAAAAAGGGAAGGGATGGATCTACTGAAACCCGTAGTCCTGAACTGCATAGGGGAAAGCACAAAAAATCTTCAGGGGACAAAAGGAAAAGGAGAAAGTACTACTCATCAGAATCGAATAGTACCTCAGATTCAGACACGAAATCTTCAGAAAGTGATAGTGATTCTGACTCAGATACATCCTCATCTTACACAAGTTCCTCCAGCGATGACAGACGGAGAAAGAGAAAGAGGTCTAGGAAAGATAAACATAGACGTGGAAAAAGAAGAGAGCAACACCGGGACAAGAGACGAAGGAAACAAGACAAAAGATCAAAGCGTAAATCAAGAAGGGAATTGACCTGTCATACTGAGTCAGATAGTGATAATAAGAGTGGCAACAGCTCTGGTGGTGAAAGTTGTGATGCTCAAGCAAAAGATCAGGAGCATAAAGATCATTCTCAGAAACATGCTGAAGGTCAGTCTTCCTTGGTTGTGGAGAAAGAATTACCTGCCGTGCTCCTTTCAAAGGGGGAGAAACTGGATATGCTGGAGGAGGAAGAATTCCCAAAGGAAAATGGAGAGCGGCGTAGCAATGGCAATGAAGCCAACTATAGATCTGAGAGAAGTGAAGGGAGGCAGCCTGATGTGATGGATGATCAACCAGGCAAATCTAGGAGTCAAAGCATGAGTATTAGTCCAAAGCGTGAGAGCAGAAGTACAAGCATTAGTCGAAAAAAGAGGTTGAGCAGAAGTCCAAGTGGTAGTAGAAGCCCTCGTGCTCCATTACGGAGGAGTTTGAGCAGGAGTCCAAACAGAAGAAGCATCAGCAGAAGCCCAGTGAGAGGTAGAAAGGGGAAAAGCGTCAGTAGAAGCCCTATGCAATCTCGTGGATATAGAAGTGTCAGTGTAAGCCCTGTTAGATCCCTTTCTCGGAGCAACCAGAGGACATCACCCAGAGCACCAGCACGAAGATCAATCAGCAGAAGCCCTGTGATTAATCACAATCATAGAAGTGTCAGTAGAAGCCCTGTTAGGTCTCATGATCATAGAAGTGTCAGTGTAAGCCCTGTGAGATCCCTTTCCCGGAGCCACAAGAGTTCACCTAGAGCACGATCACAAAGATCAATCAGCAGAAGCCCTGTGAGAACACGCAATCATAGGAGTGTCAATAGAAGCCCTGTGAGATCTAGTGGTCGGAGAAGTGTCAGTGCAAGCCCTGTAAGATCCTTTTCTCGGAGTCGTAGGAGGAGTTCACCCAGAGCACCATCTAGAAGATCAATCAGTAGAAGTCCAGTGAAAACTGGAAATGTAAGTAGAAGCCCTGTGAGATCTCATGGTCATAGAAGTGTGAGTGCAAGCCCTGTAAGATCGCTTTCTCGGGGCCGTTGGAGGAATTCACCCAGAGCACAATCACGAAAATCAATCAGCAGAAGCCCAATAAGAGGGTCCAGAAAGAGTTTAAGCAGGAGTCCAGTTAGAGCCTCTGCCAGGAGATTGAGCAGAAGTTTGAGCAGAAGCTCTGGCAGAGTCCCTTTAAGAAGCATTAGCCGAAGTCCAGCTAGAGTGCCAAGCAGAGGCAATCGTCGCAGTTATTCTAGAAGTCCTCGAGGTCGGAGCCTGTCAAGAAGTGTGTCGCCTGATGTTTCCCCAAAACGTATCAGAAGGGGAAGAGGTTTCAGTGAACAGTACTCTTACGCTAGAAGGTATAGGACCCCCTCTCGATCTCCTGTGAGGTCGTACCGCTATAATGGAAGAAGTTACCGTGACAGATATTCAGGTTACAGGAGGTACTCCCCAAGGCGTAATAGGAGCCCACTGCCACGTAGGAGAACTCCACCAAGGTTCCGGAGGAGGAGGAGCAGGACACCGTCTGTATCACGCAGCCCACGGTATCGAGGTCGACGATATAGTCGAAGTCGGAGCCGTAGCCCTGTTCGCAGTCGTACGCCTGTTGGTGCATATCGAGCTCGTGTTGAGAAGAGCAGGTCTTTGTCCCGGAGTAGAAGTCTATCACGATCTAGGGCGTCAGTGGAATCACAATCTCCACAAAAGGTGAGCAGGAACAGCAGGTCAGCGTCCCCTTCTGAGAGCCCAGATGCAAAGAAAGGCCTTGTATCTTACGAAGATGGTTCTCCTTATTCCAACTAA 2652 0.4661 MDVSIDGDPVERMVFELFYNVAPKTAENFRALCTGERGVGPSTGKSLHYKGSFFHRIVKGSIARGGDFVNRNGTGGESIYGSKFPDESPRLKHDAPGLLSMPVADRDSLGSHFIITFKSDPHLDRKHVIFGKLVQGHNILKKIEDVGDEEGFPSVTVKIINCGEHNADGKKINKSKKGRDGSTETRSPELHRGKHKKSSGDKRKRRKYYSSESNSTSDSDTKSSESDSDSDSDTSSSYTSSSSDDRRRKRKRSRKDKHRRGKRREQHRDKRRRKQDKRSKRKSRRELTCHTESDSDNKSGNSSGGESCDAQAKDQEHKDHSQKHAEGQSSLVVEKELPAVLLSKGEKLDMLEEEEFPKENGERRSNGNEANYRSERSEGRQPDVMDDQPGKSRSQSMSISPKRESRSTSISRKKRLSRSPSGSRSPRAPLRRSLSRSPNRRSISRSPVRGRKGKSVSRSPMQSRGYRSVSVSPVRSLSRSNQRTSPRAPARRSISRSPVINHNHRSVSRSPVRSHDHRSVSVSPVRSLSRSHKSSPRARSQRSISRSPVRTRNHRSVNRSPVRSSGRRSVSASPVRSFSRSRRRSSPRAPSRRSISRSPVKTGNVSRSPVRSHGHRSVSASPVRSLSRGRWRNSPRAQSRKSISRSPIRGSRKSLSRSPVRASARRLSRSLSRSSGRVPLRSISRSPARVPSRGNRRSYSRSPRGRSLSRSVSPDVSPKRIRRGRGFSEQYSYARRYRTPSRSPVRSYRYNGRSYRDRYSGYRRYSPRRNRSPLPRRRTPPRFRRRRSRTPSVSRSPRYRGRRYSRSRSRSPVRSRTPVGAYRARVEKSRSLSRSRSLSRSRASVESQSPQKVSRNSRSASPSESPDAKKGLVSYEDGSPYSN 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00612 883 MobiDBLite consensus disorder prediction 388 405 - -
Phco2g00612 883 MobiDBLite consensus disorder prediction 836 864 - -
Phco2g00612 883 SUPERFAMILY Cyclophilin-like 1 165 IPR029000 -
Phco2g00612 883 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 172 - -
Phco2g00612 883 Gene3D - 1 165 IPR029000 -
Phco2g00612 883 MobiDBLite consensus disorder prediction 591 681 - -
Phco2g00612 883 MobiDBLite consensus disorder prediction 247 284 - -
Phco2g00612 883 MobiDBLite consensus disorder prediction 310 325 - -
Phco2g00612 883 MobiDBLite consensus disorder prediction 166 195 - -
Phco2g00612 883 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 10 163 IPR002130 GO:0000413|GO:0003755
Phco2g00612 883 MobiDBLite consensus disorder prediction 456 507 - -
Phco2g00612 883 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 97 112 IPR002130 GO:0000413|GO:0003755
Phco2g00612 883 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 IPR002130 GO:0000413|GO:0003755
Phco2g00612 883 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Phco2g00612 883 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 112 124 IPR002130 GO:0000413|GO:0003755
Phco2g00612 883 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 125 140 IPR002130 GO:0000413|GO:0003755
Phco2g00612 883 MobiDBLite consensus disorder prediction 294 309 - -
Phco2g00612 883 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 164 IPR002130 GO:0000413|GO:0003755
Phco2g00612 883 MobiDBLite consensus disorder prediction 421 444 - -
Phco2g00612 883 MobiDBLite consensus disorder prediction 558 580 - -
Phco2g00612 883 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 164 - -
Phco2g00612 883 MobiDBLite consensus disorder prediction 769 793 - -
Phco2g00612 883 MobiDBLite consensus disorder prediction 688 714 - -
Phco2g00612 883 MobiDBLite consensus disorder prediction 166 883 - -
Phco2g00612 883 MobiDBLite consensus disorder prediction 340 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00612 Phco-Chr2 6041990 6048176 Dispersed/Proximal