Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00609 ATGGCGAAGAAGAAGAATTCTCTGGTGTTTATGGATGTGTCCATAGATGGGGATCCTGTTGAAAGGATGGTTTTTGAGCTTTTCTATGATGTTGCTCCGAAGACTGCTGAAAATTTCCGTGCATTATGTACAGGAGAAAGGGGAGTTGGTCCAAATACTGGAAAATCACTGCACTACAAGGGTTCTTTCTTCCATCGAATTGTGAAAGGCTCCATTGCCCGGGGTGGTGATTTTGTCAATCGAAATGGGACTGGCGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAATCACCTAGGCTAAAGCATGATGCTCCAGGCCTTCTTTCAATGCCAGTTGCTGATCGTGACACTCTTGGTTCTCATTTTATGATCACTTTTAGAGCTGATCCCCATTTTGATAGGAAACATGTAGTCTTTGGCAAGCTTGTACTAGGGCATGACATATTGAAGAAAATTGAAGATGTGGGTGATAAAGAAGGACTTCCAAGCGTAACTGTTAAAATAATTAATTGTGGTGAACATAATGAGGATGAAAAGAAGATAAATAAATCAAAAAAGGGAAGAGATGGATCTTCTGAAACCAGTAGTCATGAACTGCCTAAGGGAAAGCACCGAAAATCTTCAGGTGACAAAAGGAAAAGGAGAAAGTACTACTCTTCAGAATCTGATAGTTCCTCAGATTCAGACACAAAATCTTCAGAAAGTGACAGTGATTCTGACTCTGATATATCTTCATCATCTTACACAAGTTCCTCTAGTGATGATAGACGGAGAAAGAGAACGAGGTCTAGGAAAGATAAACATAGGCGCGGAAAAAGAAGAGATAAACACAGAGAGAAGAGACGAAGGAAACAAGATAAAAGATCAAAGCGTAGATCAAGAAGGGAATTGCCCAGTCATACTGATTCAGATAGTGAGAGTAAGAGCAACAACTTCTCTGGTAGTAAAAGTTCTGGTGCTGAAGTGAATGATCAGAATCATGAAGACCATTCTCAAAGACATGCTGAAGGTCAGTCTTCCTCAGTTGTCGAGAAAGAATTACCACCAATGCCCCCTAATAAGAGGGAGAAACTGGATATTCTAGAAGAGGAAGAATTACCAAAGGAAAATGGAGAGCGGCGTAGCAATGGCACTGGAGCCAACTATAGATCTGAAAGAAGTGAAGGGAGGCAGCCTGATGTGATGGATGATCAACCAGACAAATCTAGGAGTCAAAGCACAAGTATTAGTCCCAGGTGCAAGAGCAAAAGCCCAAGCATTAGTCCAAAAAGGAGGCTGAACAGAAGTCCAAGTGGCAGTAGAAGTCCTCATTCTCCATTACAGAGGAGTTTGAGCCAGAGTCCTGTTAGAAGCACAAGGAGGAGTCCAAACAGAAGAAGCATCAGCAGAAACCCAATGAGAGGTAGGAAGGGTAGAAGTATCAGCAGAAGCTCTGTAAGACCTCATGGACATCGAAGTGTCAGCACAAGCCCTGTAAGACCCCTTTCTCGGAGCTACCAAAAGACTTCACCAAGAACATCATTACGAAGATCGATCAGCAGAAGCCCTACGATATCTCCTGGTCAAAGAAGTGTCAGTGCAAGCCCAGGAAGATCCCCTTCTCGTAGCCAAAGGAGGAGTTCACCTAGAGCACTATCACGAAGATCAATCAGCAGAAGCCCAATGAGAAATCGCCATCATAGAAGTGTCAGTAGAAGCTCTGTAAGATCTCACGGTCGTAGAAGGGACAGTGTAAGCCCTGTAAGATCCCTTTCTCCAAGCCATAGGAAATCACCTAGAGCAAAATCTAGAAGATCAATCAGCAGAAGCCCTGTGGGAACTCGCAACCATAAAAGTGTCAATAAAGGCACCTTGAGATCTCGTGGTCATAGAACTAGCAGTGCAAGCCCTGTACGATCCCTTTCTCGAAGCGGTCGTAGGAGTTCACCCAGAGCACCTTCTCGAAGATCAATCAGTAGAAGCCCTGTGAAAACTGACAATCGTAGAAGTGTAAGTAGAAGCCCCTTGCGATCTCGTGGTCACAGAAGTGTGAGTGCTAGCCCTGTTAGATTGCCTTCACGGGACCGCCGAAGGAGTTCACCCAGAGCATCATCACGAAGATTGATCAGTAGAAGCCCAGTAAGAGTGTCAAGAAAGAGTTTAAGCAGGAGTCCCGTTCGATCGTCTGCCAGAAGCTTGAGCAGAAGCTCTGGCAGAATCCCTTTAAGAAGCCATAGCCGGAGTCCAGTTAGAGGGCCAAGCAGAGTCAATCACCGCAGTTATTCTAGGAGTCCTCGTGGTAGGAGCTTGTCTAGAAGTCTGTCACCTGATGTTTCCCCGAAACTTATCAGAAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTATAGGACTCCCTCTCGATCTCCTGTGAGATCATACCGTTATAATGGAAGAAATGACCGTGACAGATATTCAGGTTACAGAAGGTACTCCCCTAGGCGTAACAGGAGCCCACCACCACGCAGAAGAACCCCATCAAGGTTCCGGAGTAGGAGGAGTAGGACACCATCTGTATCACGGAGCCCGCGTTATAGGGGTCGACGATACAGTCGAAGCCGAAGCCCTGTTCGCAGTCGTTCACCTGTGGGCACATATCGGCCTCGTGTTGAGAGGAGCAGATCTTTGTCCCGTAGTAGCAGGTCTTTGTCCCGGAGCAGGAGTCCATCACGATCCAGGAATTCAGTGGAGTCACAATCTCCACGAAAGAAGAGCAGGTCAAGGTCCCAAAGCTTTGATGGAAAGAAAGGCCTTGTATCTTACGGAGATGGTTCTCCAGATTCAAGCTAA 2820 0.4567 MAKKKNSLVFMDVSIDGDPVERMVFELFYDVAPKTAENFRALCTGERGVGPNTGKSLHYKGSFFHRIVKGSIARGGDFVNRNGTGGESIYGSKFPDESPRLKHDAPGLLSMPVADRDTLGSHFMITFRADPHFDRKHVVFGKLVLGHDILKKIEDVGDKEGLPSVTVKIINCGEHNEDEKKINKSKKGRDGSSETSSHELPKGKHRKSSGDKRKRRKYYSSESDSSSDSDTKSSESDSDSDSDISSSSYTSSSSDDRRRKRTRSRKDKHRRGKRRDKHREKRRRKQDKRSKRRSRRELPSHTDSDSESKSNNFSGSKSSGAEVNDQNHEDHSQRHAEGQSSSVVEKELPPMPPNKREKLDILEEEELPKENGERRSNGTGANYRSERSEGRQPDVMDDQPDKSRSQSTSISPRCKSKSPSISPKRRLNRSPSGSRSPHSPLQRSLSQSPVRSTRRSPNRRSISRNPMRGRKGRSISRSSVRPHGHRSVSTSPVRPLSRSYQKTSPRTSLRRSISRSPTISPGQRSVSASPGRSPSRSQRRSSPRALSRRSISRSPMRNRHHRSVSRSSVRSHGRRRDSVSPVRSLSPSHRKSPRAKSRRSISRSPVGTRNHKSVNKGTLRSRGHRTSSASPVRSLSRSGRRSSPRAPSRRSISRSPVKTDNRRSVSRSPLRSRGHRSVSASPVRLPSRDRRRSSPRASSRRLISRSPVRVSRKSLSRSPVRSSARSLSRSSGRIPLRSHSRSPVRGPSRVNHRSYSRSPRGRSLSRSLSPDVSPKLIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRNDRDRYSGYRRYSPRRNRSPPPRRRTPSRFRSRRSRTPSVSRSPRYRGRRYSRSRSPVRSRSPVGTYRPRVERSRSLSRSSRSLSRSRSPSRSRNSVESQSPRKKSRSRSQSFDGKKGLVSYGDGSPDSS 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00609 939 MobiDBLite consensus disorder prediction 599 654 - -
Phco2g00609 939 MobiDBLite consensus disorder prediction 387 401 - -
Phco2g00609 939 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Phco2g00609 939 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Phco2g00609 939 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Phco2g00609 939 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Phco2g00609 939 MobiDBLite consensus disorder prediction 481 552 - -
Phco2g00609 939 MobiDBLite consensus disorder prediction 350 373 - -
Phco2g00609 939 MobiDBLite consensus disorder prediction 305 322 - -
Phco2g00609 939 MobiDBLite consensus disorder prediction 778 792 - -
Phco2g00609 939 MobiDBLite consensus disorder prediction 177 939 - -
Phco2g00609 939 MobiDBLite consensus disorder prediction 402 463 - -
Phco2g00609 939 MobiDBLite consensus disorder prediction 261 295 - -
Phco2g00609 939 MobiDBLite consensus disorder prediction 825 849 - -
Phco2g00609 939 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Phco2g00609 939 MobiDBLite consensus disorder prediction 744 770 - -
Phco2g00609 939 MobiDBLite consensus disorder prediction 215 239 - -
Phco2g00609 939 MobiDBLite consensus disorder prediction 464 480 - -
Phco2g00609 939 SUPERFAMILY Cyclophilin-like 4 178 IPR029000 -
Phco2g00609 939 MobiDBLite consensus disorder prediction 805 820 - -
Phco2g00609 939 MobiDBLite consensus disorder prediction 889 906 - -
Phco2g00609 939 MobiDBLite consensus disorder prediction 177 206 - -
Phco2g00609 939 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Phco2g00609 939 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Phco2g00609 939 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Phco2g00609 939 MobiDBLite consensus disorder prediction 699 737 - -
Phco2g00609 939 Gene3D - 1 183 IPR029000 -
Phco2g00609 939 MobiDBLite consensus disorder prediction 907 921 - -
Phco2g00609 939 MobiDBLite consensus disorder prediction 553 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00609 Phco-Chr2 6010739 6016717 Tandem