Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00590 ATGGGAAAACAGTGGTCTCTCTTCAGTGTTATGGATACCCTTTTGTTGTGTGTCCTTCTTTCGTCTGAAGTAGTTTTGACAAGTATTCTCAAGGTTGGCAAAGTCTATCCGCGGATTGAAGGTTCTCAAATGAATTGGATTGACAGGGAAGGCACTTTGCTTGTTTCATACAAAGGAGAATTTGGATTTGGCTTTGTCACCACTCCAAATGACATCACATTGTTTCTACTAGCAATACTCCACATGGGCAGCAACAGAGTGGTTTGGGTAGCAAATAGGGGTCTTCCTGTTTCCAACTCTGATAAGTTTGTGTTTGATGAGAAGGGCAACCTCTATTTGCTTAAAGGAGCAGCAGTGGTATGGTCTGCAGGTACAGAAAACAAGGGAGTTTCTTCAATGGAATTGAAAGACACTGGAAACTTGGTTTTGCTAGGGAATGATAGTAGTGTGATTTGGCAGAGTTTCAGCCACCCAACAGATACCTTGTTGCCAATGCAGGACTTCATTGAGGGAATGAAACTGTTTAGTGAACCTGGTCCTAACAACTTGACCTATGTTTTTCAGATTGAATCTGGCAATGCCATTCTCTCCACTGGTTTACAAACTCCACAGCCTTATTGGTCTATGAAGGAGGATAGCCGCAAAAAAATCATCTACAAAAATGGTGATGTGGTGACTTCAGCTACCCTTAATGCAAGCTCCTGGAGCTTCTATGATCAAACTAAATCCTTGTTGTGGCAATTTGATTTTGCTGAAGAATCAGATTCAAATGGCACTTGGATTTTAGTTTTGGGGAGTGACGGCCTCATCACATTCTCCAATCTCCAAAGTGGAGGAGCAATTGTTGCTTCACCAAGAAGAATACCACAAGATTCTTGCAGCACCCCAGAACCTTGTGATCCCTATTACATATGCAGTGGTGAAAAAAAGTGCACCTGCCCTTCTGTTCTTAGCTCCAGTCCTAATTGCAAACCCGGGTTTGTCTCTCCTTGCAGCTCAAAAGACACCATTGAGCTCCTCAAAGCTGATGATCGACTCCATTACTTTGCACTTGGGTTTGTTCCACCCTCTTCGAAGACTGATTTGATTGGTTGCAAAAGCTCTTGCAGTGCAAATTGCTCATGCCTTGCTATGTTCTTCAACAGCAGTTCAGGGAACTGTTTCCTATTGGACTGGATTGGAAGCTTTGAGAAATCTGTCGAAGATTCTGGTATAGTGTCCTACATTAAGGTGGTATCTAGAGATGGAGACACTAGAGACAGTGGAAGCAGCACTATGCAGGCAATAGTTGTTGTTATCATTGTGATAGTAACATTGTTTGTCATTTCTGTTATGCTGTTTGTGGCACATAGATGTTTCAGGGAAAAAGAAGATTTGCCGGAGTCTCCTCAAGAGAATTCAGAAGATGACAATTTCTTGGAGGGTTTAACCGGCATGCCAATCCGTTACAGCTACAATGATCTAAAAACTGCAACAAGTAACTTCTCAGTGAAGCTAGGAGAAGGGGGTTTTGGATCAGTTTATAGAGGAGCTGTACCTGATGGTACTCAACTAGCTGTGAAGAAGTTGGAAGGAATTGGCCAAGGGAAGAAAGAGTTCAGGGTTGAAGTTAGCATTATAGGGAGCATTCATCACCACCATTTAGTAAGGCTTAAAGGGTTCTGTGCTGAAGGGTCTCATAGACTTCTTGCTTATGAGTACATGGCCAATGGATCATTGGAGAAATGGATATTCAACAAGAACAGAGAGGAATTTGTGTTGGATTGGGATACAAGGTATAACATAGCACTTGGAACAGCAAAAGGACTTGCTTACCTCCACGAAGATTGTGACTCAAAGATTATCCATTGTGACATCAAACCAGAAAATGTGCTTCTAGATGATAACTTCCTGGTCAAGGTTTCTGATTTTGGCCTGGCTAAGCTCATGACACGTGAACAAAGCCATGCTTTCACAACACTTAGAGGCACTAGAGGGTATCTTGCACCTGAGTGGATCACAAACTGTGCCATATCAGAGAAAAGTGACGTTTATAGCTATGGCATGGTGTTACTAGAGATCATTGGAGGGAGGAAAAACTATGATCCTCAGGAAACTTCAGAGAAAACCAATTTCCCATATTTTGCTTTTAAGATGATGGAAGAAGGGAAGGTGAGAGAGATTCTTGACTCAAAGCTAGAAACTAATGAAAATGATGAGAGGGTTCAAACTGCTGTAAAAGTTGCATTGTGGTGCATACAAGAAGACATGTCTTTGAGGCCTACCATGACCAAAGTTGTCCAAATGCTAGAGGGTCTATGCACTGTTCATAAGCCACCAAGTTGTTATGTCCTTGGTTCTCAGTTTTACTCAAATAGTGATGCCGGCACTTCTTCAGGACCATCAGATTGTAACAGTGATGCCAATCTTTCTGCTGTTCGGCTTTCAGGGCCAAGATAA 2439 0.4223 MGKQWSLFSVMDTLLLCVLLSSEVVLTSILKVGKVYPRIEGSQMNWIDREGTLLVSYKGEFGFGFVTTPNDITLFLLAILHMGSNRVVWVANRGLPVSNSDKFVFDEKGNLYLLKGAAVVWSAGTENKGVSSMELKDTGNLVLLGNDSSVIWQSFSHPTDTLLPMQDFIEGMKLFSEPGPNNLTYVFQIESGNAILSTGLQTPQPYWSMKEDSRKKIIYKNGDVVTSATLNASSWSFYDQTKSLLWQFDFAEESDSNGTWILVLGSDGLITFSNLQSGGAIVASPRRIPQDSCSTPEPCDPYYICSGEKKCTCPSVLSSSPNCKPGFVSPCSSKDTIELLKADDRLHYFALGFVPPSSKTDLIGCKSSCSANCSCLAMFFNSSSGNCFLLDWIGSFEKSVEDSGIVSYIKVVSRDGDTRDSGSSTMQAIVVVIIVIVTLFVISVMLFVAHRCFREKEDLPESPQENSEDDNFLEGLTGMPIRYSYNDLKTATSNFSVKLGEGGFGSVYRGAVPDGTQLAVKKLEGIGQGKKEFRVEVSIIGSIHHHHLVRLKGFCAEGSHRLLAYEYMANGSLEKWIFNKNREEFVLDWDTRYNIALGTAKGLAYLHEDCDSKIIHCDIKPENVLLDDNFLVKVSDFGLAKLMTREQSHAFTTLRGTRGYLAPEWITNCAISEKSDVYSYGMVLLEIIGGRKNYDPQETSEKTNFPYFAFKMMEEGKVREILDSKLETNENDERVQTAVKVALWCIQEDMSLRPTMTKVVQMLEGLCTVHKPPSCYVLGSQFYSNSDAGTSSGPSDCNSDANLSAVRLSGPR 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00590 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Phco2g00590 812 Pfam D-mannose binding lectin 87 167 IPR001480 -
Phco2g00590 812 ProSiteProfiles Bulb-type lectin domain profile. 38 156 IPR001480 -
Phco2g00590 812 Pfam Protein kinase domain 496 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00590 812 CDD B_lectin 54 158 IPR001480 -
Phco2g00590 812 Gene3D Phosphorylase Kinase; domain 1 461 567 - -
Phco2g00590 812 SUPERFAMILY Protein kinase-like (PK-like) 475 764 IPR011009 -
Phco2g00590 812 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 43 775 - -
Phco2g00590 812 MobiDBLite consensus disorder prediction 789 805 - -
Phco2g00590 812 FunFam Serine/threonine-protein kinase 41 156 - -
Phco2g00590 812 FunFam S-receptor-like kinase 5 568 772 - -
Phco2g00590 812 ProSiteProfiles Protein kinase domain profile. 493 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00590 812 ProSitePatterns Protein kinases ATP-binding region signature. 499 522 IPR017441 GO:0005524
Phco2g00590 812 FunFam serine/threonine-protein kinase PBS1-like 461 567 - -
Phco2g00590 812 CDD STKc_IRAK 499 766 - -
Phco2g00590 812 MobiDBLite consensus disorder prediction 789 812 - -
Phco2g00590 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 209 IPR036426 -
Phco2g00590 812 Gene3D Transferase(Phosphotransferase) domain 1 568 773 - -
Phco2g00590 812 PIRSF SRK 8 809 IPR024171 GO:0004674
Phco2g00590 812 SMART serkin_6 493 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00590 812 SMART blect_4 45 158 IPR001480 -
Phco2g00590 812 Gene3D - 45 157 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00590 Phco-Chr2 5747829 5750267 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phco2g00590 Pkinase 5.7e-53 CL0016