Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00563 ATGATGTGGAGAGAGAGAGCTGTGTTGGTGCTACTGCTACTTTTAGTCCACCATACTTGTGCTACCATGGAAGACCAACAACACGTTTGTCCCCCTTCTTTCTGTGGAAAAATCAGCAACATCAGTTATCCATTTCGATTAAAAGGCGACCCAGAAAAGTGTGGTGAGGAAAGGTATGAGCTTGGTTGTGAGAATAACGTTACGGTGTTGTATCTGTACTCTGCAAAATATCATGTGCAGTCAATAAACTACAACAACTACACGGTGAGAGTGGTTGATCCTGCTCTTCAACACCATAATCTCTCCTCCCTTCCTCTCCGTTTCCTCTCTCGCTCCAATTTCTCTGACACTTACAAGTACACTTCCTTTTACGACTCGGATCCATACCAAGCCTTTGTAAACGTCGATAAAAATTGGGAATATCTGAGTTTCGAGCATATAGTGTTTGTGAATTGTAACTATTCAGTGGGAGAGAAAGGGAAGTATGTGGAGAGTGGAGAGTGGGTGAAGTGGGAGGGGAAGGGCTATGCATATGCAATTGGTGGAGACCTAAAAGCTGAGGACTTAGAAGTTGGGTGTGAGGTAAAGCTTGTTGCTCCCACTTCTCTCTCCACTTTCGATAACAATTCCTACACTGCCATGCACACCGCACTCTCCTATGGATTTGAGATTTCATGGATAAACCTCGCCTGTAGGAAACGTTGTTCACTTCCCTATAGAGACTGCTATTTCGACTCTTCTAACCAGAAGCTTCAATGCATCACATACTCAGTATATTGGACACCACTTCTGGAAGAGCTAAAGATGTATATACCAGGTATTCTCATATATATCTCTATAGCATGGGCCTACAAAGTTTTGTTTGGATTGCCATTCTTAATTGTTATTTTTATATGTAAATGGAGAAAAAGACATATGTCAATGTATGAAAATATTGAAAATTACCTTGAACAAAATAGTTTGGCACCTATTAGATACTCATACAAGGAAATCAAGAAGATGGCTGCAGGTTTCAAAGAGAAGTTAGGTGAAGGAGGATTTGGCTCTGTCTTTAAGGCAAAGTTGCGCAGTGGACCTTCTGTGGCCATCAAAATGTTAGGCAAATCCAAAGCAAATGGACAAGATTTTATCAGTGAAGTTGCAACCATTGGAAGAATACATCACCAAAATGTGGTACGATTAATTGGATTTTGTGTTAGTGGCTCAAAGCGTGCTCTTGTCTATGAATTCATGCCCAATGGATCTCTTGATAAATTTATTTTCTCAAAAGAGAGAAATATACATTTAAGCTATGAAAATATATATAATATATCAATTGGAGTGGCTCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGCAAATTTTACATTTTGACATCAAACCTCATAACATCTTACTAGATGAAAACTTCATCCCTAAGGTTTCCGACTTTGGATTGGCAAAGTTATATCCAATAGATAATAGCATAGTCACAATGACTGCAGCAAGAGGAACCATTGGATATATGGCTCCTGAATTGTTCTATAATAATATTGGAAGAATATCCCATAAGGCTGATGTTTATAGCTTTGGAATGTTGTTGATGGAGATGGCAAGCAAGAGGAAGAATCTAAATCCCCATGCAGATCACTCAAGTCAACTTTACTTTCCTCTTTGGATCTATGATCATGTCAAAGAAGAGGAAGATATAGACATGGAAGATTTGACTGCTGAGGAAAAGATAATAGCAAAGAAAATGATCATAGTGTCTCTTTGGTGCATACAATTGAAACCAACTGATCGACCCTCAATGAATAGAGTGGTGGAAATGCTTGAAGGAGACATTGAAGACTTGGAAATACCTCCAAAGCCTACTTTATTTCCAGATGAAATGAGTAGAGATGGTGAAACAATAAACTCAGCATCGAATGAATTGAACTCGTTCTCCTAA 1935 0.3917 MMWRERAVLVLLLLLVHHTCATMEDQQHVCPPSFCGKISNISYPFRLKGDPEKCGEERYELGCENNVTVLYLYSAKYHVQSINYNNYTVRVVDPALQHHNLSSLPLRFLSRSNFSDTYKYTSFYDSDPYQAFVNVDKNWEYLSFEHIVFVNCNYSVGEKGKYVESGEWVKWEGKGYAYAIGGDLKAEDLEVGCEVKLVAPTSLSTFDNNSYTAMHTALSYGFEISWINLACRKRCSLPYRDCYFDSSNQKLQCITYSVYWTPLLEELKMYIPGILIYISIAWAYKVLFGLPFLIVIFICKWRKRHMSMYENIENYLEQNSLAPIRYSYKEIKKMAAGFKEKLGEGGFGSVFKAKLRSGPSVAIKMLGKSKANGQDFISEVATIGRIHHQNVVRLIGFCVSGSKRALVYEFMPNGSLDKFIFSKERNIHLSYENIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIDNSIVTMTAARGTIGYMAPELFYNNIGRISHKADVYSFGMLLMEMASKRKNLNPHADHSSQLYFPLWIYDHVKEEEDIDMEDLTAEEKIIAKKMIIVSLWCIQLKPTDRPSMNRVVEMLEGDIEDLEIPPKPTLFPDEMSRDGETINSASNELNSFS 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00563 644 FunFam serine/threonine-protein kinase PBS1-like 304 410 - -
Phco2g00563 644 PANTHER RUST RESISTANCE KINASE LR10-RELATED 309 627 IPR045874 GO:0004672
Phco2g00563 644 Gene3D Transferase(Phosphotransferase) domain 1 411 614 - -
Phco2g00563 644 MobiDBLite consensus disorder prediction 620 644 - -
Phco2g00563 644 Gene3D Phosphorylase Kinase; domain 1 309 410 - -
Phco2g00563 644 Pfam Protein kinase domain 339 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00563 644 ProSiteProfiles Protein kinase domain profile. 336 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00563 644 MobiDBLite consensus disorder prediction 630 644 - -
Phco2g00563 644 Pfam Wall-associated receptor kinase galacturonan-binding 30 93 IPR025287 GO:0030247
Phco2g00563 644 SMART serkin_6 336 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00563 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Phco2g00563 644 SUPERFAMILY Protein kinase-like (PK-like) 321 607 IPR011009 -
Phco2g00563 644 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Phco2g00563 644 FunFam PR5-like receptor kinase 411 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00563 Phco-Chr2 5402947 5407158 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco2g00563 Pkinase 2.2e-48 CL0016