Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00560 ATGTTATGGACTTACAAAGTTTTGTTTGGATTGCCATTCTTAATTGTGATTTTTATATGTAAATGGAGAAAAATGCACATGTCAATGTATGAAAATATTGAAAATTACCTTGAACAAAATAGCTTGGCACCTATTAGATACTCATACAAGGAAATCAAGAAGATGGCTGCAGGTTTCACAGAGAAGTTAGGTGAAGGAGGATTTGGCTCTGTCTTTAAGGCAAAGTTACGTAGTGGACCTTTTGTGGCTATCAAAATGTTAGGCAAATCCAAAGGAAATGGACAAGATTTTATCAGTGAAGTTGCAACCATTGGAAGAATACATCATCAAAATGTGGTACGGTTAATTGGATTTTGTGTTAGTGGCTCAAAGCGTGCTCTTGTCTATGAATTCATGCCCAATGGATCTCTTGATAAATTTATTTTCTCAAAAGATGGAAGTGTACATTTAAGCTATGAAAAGATATATAATATATCAATAGGAGTGGCTCGTGGGATTGCTTATCTCCACCATGGTTGTGAGATGCAGATTTTGCATTTTGACATCAAATCCCATAACATCTTACTAGATGAAAACTTCATCCCTAAGGTTTCTGACTTTGGATTGGCAAAGTTATATCCAATAGATAATAGCATTGTCACAATCACTGCAGCAAGAGGAACCATTGGATATATGGCTCTAGAATTGTTTTATAATAATATTGGAGGAATATCTCATAAGGTTGATATTTATAGCTTCGGAATGTTGTTGATGGAGATGGCAAGTAAGAGGAAGAATCTAAATACTCATGCAGACCACTCAAGTCAACTTTACTTTCCACTTTGGATCTATGATCATATTAGGGAAGAGGAAGATGTAGATGTCGAAGATGTGACAGAAGAAGAAAATAAAATAGCAAAGAAGATGATCATAGTTGCACTATGGTGTATACAACTAAAACCAAATGATCGACCCTCAATGAATAGAGTAGTGGAAATGCTTGAAGGAAATATTGAAGAGTTGGAAATACCTCCAAAACCTATTCTATTTCCAGAAGATGAAACAGTAATAAAAGATGAAACAGTAATAGAAGATCACACAATCAACTCTAGCTAG 1095 0.3479 MLWTYKVLFGLPFLIVIFICKWRKMHMSMYENIENYLEQNSLAPIRYSYKEIKKMAAGFTEKLGEGGFGSVFKAKLRSGPFVAIKMLGKSKGNGQDFISEVATIGRIHHQNVVRLIGFCVSGSKRALVYEFMPNGSLDKFIFSKDGSVHLSYEKIYNISIGVARGIAYLHHGCEMQILHFDIKSHNILLDENFIPKVSDFGLAKLYPIDNSIVTITAARGTIGYMALELFYNNIGGISHKVDIYSFGMLLMEMASKRKNLNTHADHSSQLYFPLWIYDHIREEEDVDVEDVTEEENKIAKKMIIVALWCIQLKPNDRPSMNRVVEMLEGNIEELEIPPKPILFPEDETVIKDETVIEDHTINSS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00560 364 Gene3D Transferase(Phosphotransferase) domain 1 132 336 - -
Phco2g00560 364 PANTHER RUST RESISTANCE KINASE LR10-RELATED 30 347 IPR045874 GO:0004672
Phco2g00560 364 FunFam serine/threonine-protein kinase PBS1-like 25 131 - -
Phco2g00560 364 Pfam Protein kinase domain 60 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00560 364 Gene3D Phosphorylase Kinase; domain 1 30 131 - -
Phco2g00560 364 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Phco2g00560 364 SMART serkin_6 57 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00560 364 SUPERFAMILY Protein kinase-like (PK-like) 42 328 IPR011009 -
Phco2g00560 364 ProSiteProfiles Protein kinase domain profile. 57 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00560 364 FunFam PR5-like receptor kinase 132 339 - -
Phco2g00560 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00560 Phco-Chr2 5369222 5370316 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco2g00560 Pkinase 1.6e-46 CL0016