Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00541 ATGGAAGGAATAAGCAAGAAGGAGCCATACTTTTGTGACAGACCAAGCATCTTCTCTTCTGCTCCGGAGGCACCACCTAGTCCAAGTACTCCACTTCAGCATCCACATGAAAAGAAACAGGTATCTGTTGAGGAAGAAGAGGAAGAAAATAAGGAGTCAAAGCATGCTACCATATTGGATCTAAATGTTTCAGGTGATGATTCTTGTACTGCAGAAGGACTAGAACTCAACCTCATAACCTGTTTGGATGTGGGGTCATCATCCAATGTCAATTCTTCATCAGAAGCCCCTCTTGGTTCTGATGCTGCTGAGCCAAGAGTGTTCTCTTGCAACTACTGCCACAGAAAGTTCTACAGTTCACAAGCACTAGGGGGCCACCAAAATGCACACAAGAGGGAGAGGTCAATAGCAAAGAGAGGGCACAGGTTTGGATCACAGATAATGGCCTTTGGCCTTCCCTTATTGCATAATAACAACCACTATGCAAGCATGGCTTCTCTGCCCCTTTATGGTGCTAGCAACAATAGAGGAGGAGCTCTTGGAATTCAAGCACACTCTATGATCCAAAAGCCTTCTCATCATCATCATCATCATGTGAGTGGATTTGGAAACTCTTATGCACACCATCACAGTTGGTCAAGACCCATCATTGAACAACAACCTGGAATAGCAATGGCTGATTTTCACAGAACAAAATCAGCATTTTCATCATCACAAACAAGTGTTGGTAGGTTTGAAATGGTTAATACCATGATGAATTCTTCAGCCAAAAAGGAGATCAGTGGATGTGTGGCTAGAGCTGAATCTCGTTTGAAGAGTAATAATCAAGAAGAAATGAAGCACCTTGATTTATCCCTCAAGCTCTAA 867 0.4291 MEGISKKEPYFCDRPSIFSSAPEAPPSPSTPLQHPHEKKQVSVEEEEEENKESKHATILDLNVSGDDSCTAEGLELNLITCLDVGSSSNVNSSSEAPLGSDAAEPRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRGHRFGSQIMAFGLPLLHNNNHYASMASLPLYGASNNRGGALGIQAHSMIQKPSHHHHHHVSGFGNSYAHHHSWSRPIIEQQPGIAMADFHRTKSAFSSSQTSVGRFEMVNTMMNSSAKKEISGCVARAESRLKSNNQEEMKHLDLSLKL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00541 288 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 6 288 IPR044246 GO:0009788
Phco2g00541 288 MobiDBLite consensus disorder prediction 1 54 - -
Phco2g00541 288 ProSiteProfiles Zinc finger C2H2 type domain profile. 108 135 IPR013087 -
Phco2g00541 288 ProSitePatterns Zinc finger C2H2 type domain signature. 110 130 IPR013087 -
Phco2g00541 288 SUPERFAMILY beta-beta-alpha zinc fingers 105 135 IPR036236 -
Phco2g00541 288 Gene3D Classic Zinc Finger 96 148 - -
Phco2g00541 288 MobiDBLite consensus disorder prediction 37 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00541 Phco-Chr2 5147759 5148625 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00541 2 5147759 5148625 Phco7g00710 7 5445169 5445993 PCT