Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00529 ATGTTAGGCATTTCTCACTTACTTCTCTTCATCTTTTTCACCACCTTCTCTCTCTTCTCTCCAATTCATTCCCTCTTCTTCAACATAACCAACTTTGATGATCCAACATCAGACATATCCTACCAGGGTGATGGAAGATCAACCAACGGCTCCATCGATCTTAACAAAGTTAGCTACTATTTTCGTGTCGGAAGGGCACTCTACTCCAAACCCCTCCGCCTCTGGGACCCATCTTCCAATGTTGTCACCGACTTTGTCACGCGCTTCACCTTCTCCATTGACAGAGTAAACAACACTGAGACCTCTTATGCCGATGGCTTTGCGTTTTACCTTGCCCCTCTTGGCTACCAGATCCCACCAAATTCCGCAGGTGGCACCTTTGCCCTCTTCAACGCCACCACCAACAGTGACCTCCCTCAGAACCATGTTTTGGCTGTGGAGTTTGACACCTTTATTGGCTCCACTGATCCCCCAATGAAACATGTTGGTGTAAACGACAACTCTTTAACCTCTGTGGCCTTTGCCAACTTTGACATCGACAACAACCTCGGAAAAATGTGTCACACTTTGATCACCTACACCGCCTCCTCTCAAACCCTCTTTGTTTCTTGGTCCTTCAAAGGAAGACCAACCACAAAGGACAACAACAATAATTCTTCTCTGTCTTACAGTATCGACCTCAAGAAAATTCTCCCGGAGTGGGTCAATATTGGTTTCTCCGCCTCAACTGGACTTTACACTGAACGCAATGTTATTTATTCGTGGGAGTTCAATTCCTCTTTGAAAGATTCCTCCGCGGAAAATGAGGGTGTGAAGCTAAAAGACAAAGGGTCAAAGCTTGTGTTAATCGTTGCCGTTGTTTGTCCACTGGTTCTTCTGTTTGTGGGGGCGAGTATTTTTGTGGTCATGTTGATAAAGAGAAAGAGAAGAAAGGATGCTTGTATGTTATATGATGCTGGCGACGACGAGATTGGTCCAATTTCAGTTAAATTTGACTTGGATAGAGGAACTATCCCGAGAAGATTCGAGTACAAAGAGCTGGTGGATGCCACCAACGGTTTTTCAGATGAAAGAAGGCTTGGACAAGGAGCTTCGGGGCAGGTATACAAGGGTGTGTTGAGTTACCTAGGAAGAGTTGTGGCCGTGAAGAGAATCTTTGCAGACTTCGAGAATTCAGAGAGAGTTTTCACCAACGAGGTTAGAATAATAAGCCGTTTAATCCACAAAAACTTGGTCCAGTTCATAGGGTGGTGTCACGAAGAAGGTGAGTTTCTGTTGATTTTCGAATACATGCAAAATGGAAGCCTCGACACTCATTTGTTTGGAAACAAGAGGATGTTAGAGTGGCATGTGAGGTACAAAATCGCACTTGGCGTTGTAACTGCGCTTCATTATCTTCATGAGGACGCAGAGCAGTGTGTGCTACACAGGGACATAAAATCTGCGAATGTGTTGTTGGACATGGAGTTTAACACCAAGGTGGGGGATTTTGGTATGGCCAAATTGGTGGATCCAAGGTTGAGAACTCAACGAACTGGGGTGGTTGGAACATACGGTTACTTAGCACCTGAATATGTGAACGGAGGAAGAGCGAGTAGGGAATCAGATATGTACAGTTTTGGAGTGGTGGCATTGGAGATAGCAAGTGGGAGGAGGACTTACGAAGATGGGGAGTTTCATGTTTGTTTGATGAATTGGGTGTGGCAGCTTTATGTGGAGGGGGAAGTTCTGAGGGCTGCAGATGAGAAATTGAGGAATGAGTTTGATGAGAATGAGATGAGGAGTTTGCTTGTGGTGGGGTTATGGTGCACAAACCCTAATGATAAAGAGAGGCCTAAGGCTGCACAAGTGATGAAGGTTTTGCAGCTTGAAGCACCATTGCCGCAGCTTCCACTTGATATGTATGAACGTGCTCCTCCCATGCAACCGATTACGATGCCCCATCATCACAGTAATCCTCATTCAGGCCAATCACAACCCATTACTAACAGTTTTGTGAGTGTTGGAAGGTGA 2013 0.454 MLGISHLLLFIFFTTFSLFSPIHSLFFNITNFDDPTSDISYQGDGRSTNGSIDLNKVSYYFRVGRALYSKPLRLWDPSSNVVTDFVTRFTFSIDRVNNTETSYADGFAFYLAPLGYQIPPNSAGGTFALFNATTNSDLPQNHVLAVEFDTFIGSTDPPMKHVGVNDNSLTSVAFANFDIDNNLGKMCHTLITYTASSQTLFVSWSFKGRPTTKDNNNNSSLSYSIDLKKILPEWVNIGFSASTGLYTERNVIYSWEFNSSLKDSSAENEGVKLKDKGSKLVLIVAVVCPLVLLFVGASIFVVMLIKRKRRKDACMLYDAGDDEIGPISVKFDLDRGTIPRRFEYKELVDATNGFSDERRLGQGASGQVYKGVLSYLGRVVAVKRIFADFENSERVFTNEVRIISRLIHKNLVQFIGWCHEEGEFLLIFEYMQNGSLDTHLFGNKRMLEWHVRYKIALGVVTALHYLHEDAEQCVLHRDIKSANVLLDMEFNTKVGDFGMAKLVDPRLRTQRTGVVGTYGYLAPEYVNGGRASRESDMYSFGVVALEIASGRRTYEDGEFHVCLMNWVWQLYVEGEVLRAADEKLRNEFDENEMRSLLVVGLWCTNPNDKERPKAAQVMKVLQLEAPLPQLPLDMYERAPPMQPITMPHHHSNPHSGQSQPITNSFVSVGR 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00529 670 Gene3D - 23 274 - -
Phco2g00529 670 Gene3D Phosphorylase Kinase; domain 1 339 430 - -
Phco2g00529 670 SUPERFAMILY Protein kinase-like (PK-like) 338 642 IPR011009 -
Phco2g00529 670 CDD lectin_legume_LecRK_Arcelin_ConA 27 261 IPR001220 GO:0030246
Phco2g00529 670 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Phco2g00529 670 MobiDBLite consensus disorder prediction 648 670 - -
Phco2g00529 670 SMART serkin_6 354 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00529 670 FunFam L-type lectin-domain containing receptor kinase IX.1 431 631 - -
Phco2g00529 670 Pfam Protein kinase domain 355 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00529 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 261 IPR013320 -
Phco2g00529 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Phco2g00529 670 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524
Phco2g00529 670 Pfam Legume lectin domain 26 268 IPR001220 GO:0030246
Phco2g00529 670 Gene3D Transferase(Phosphotransferase) domain 1 431 626 - -
Phco2g00529 670 ProSiteProfiles Protein kinase domain profile. 354 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00529 670 MobiDBLite consensus disorder prediction 642 670 - -
Phco2g00529 670 FunFam L-type lectin-domain containing receptor kinase IX.1 339 430 - -
Phco2g00529 670 PANTHER - 48 626 - -
Phco2g00529 670 ProSitePatterns Legume lectins alpha-chain signature. 231 240 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00529 Phco-Chr2 4946266 4948278 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco2g00529 Pkinase 3.3e-50 CL0016