Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00523 ATGGGTGCAACTAAGCTAAACCTTATTGATATCGCTATTCCAGACTTGAGAGAAGTTGGTGACTTGATGACAGGGGAGCCGGCGACTGAAGCCCTGGTGAACGGCGATCATAACTATAACGGTCCTAAGGTAGCGAAATTCCTTTTCGGTGCCAAGTGGAAGGGTCGTCGTTCTACGGATAAAAGTTACTCTAGAGATAATAGGCTGATCTTCCCCAAAAACTCATATCGACAAGAAGGTTTAACACCTCGATGTCGGCTCTTCGCCACCTGGGGCTTTCCAAGGGTTAGATTGCTCCGGGAAAATGTTGGAAAGCGTGGGCTTTCTCATTTCCATCCTCACACCGCAACAAGAGGACCCCCAAAACACAAGGACCCACCAAAACCCACAGCCTGTCTCCTCTCCCGTCGTCCTCCTCCTAGCTTCTCGCCACGAAGCAGGAGGTGGCAGACCCCGGCCACAACCACAACCACGGCGATGTCTTCTCATGGTGGTACCACCACGTCACAACTGTTCAATGTAACCATGGTGGCGGTTGACAAAGGCAAGAGCAGTGGCCACGCCTTTCGATGGACCTTAAAAAACATAGACAACCCCGTCTTCATCGCAGTCCATGTCAAACACAAAAACATTACTCATCAGGGCACCAATGTTTTTCCTCCCACCGAAGACGAAGTAGCCAATGTTTTCAACCCCATACGTCAATTATGTCAAAACAACAACGTTAAGTTGAAAGAAGCCGTAATTGATGACAGTGAGGTTGTGAGAGGAATAGTGGAATATGCAAAGAAAAATCGCGTGAATACTATAGTCATTGGTGCAGCCCACTCCAACAAGAATACTTTGGCAAGGACTCTTTACCTGAGGAGTGGAAGCAAAAAATTAAAAGGCCATGTGCCAACAGGCGTAATGAAATCAGCACCAGATCATAGTTCAGTGTATGTGATTTCAAAAGGGAAGATAGTGGGAGCTCGACCAGCAATACGGCCAATGGTAAACATGGTTACACCACCAAGTGAAAATGGAATAAGTGAGAACAGGACAAATACACAAAGAACTGGGAGCACCAATGGAAGGTCACAAAGATCACCTCTACTAGAAATGCCAAGGTCTTCTTCAGTTGGTCAATCAATGGATCGCAGGTTACTATTTTGCCGCAGCCCAGGTGAAAGTGACTCTTCAAGGTCACACAAGTTAGGGTCAGCAGATGGAACTAAACAAGAGTGCGATTCAGACTCTCCATCAGATTCTCAATTCACAGCAGAGATGGAAAGTGAGATGAAAAGGCTGAGGCTCAAACTGAAGCACACGATGGACTTGTACAATTCAGCTTGCAAAGAAACAGTGTCAACCCAAAGCAAGGATAAAGAGATTAACCAACGGAAACTGGACGAGGAACGGATAGCTGAGGTGGCTAAGTTGTCTAAAGAGGCAGCTCTTGCAATGGCAGAAAAGGAGAAATTTAAAGCCAGAGCTGCATTGGAAGCAGCTGAGGAAGCCATTAAGATGGTTGAAAAGGAAGCACAGAGAAGATTTCATGCAGAGATGAAGGCAAGAAGAGAGGCACATGAAAAGGATAGAGCATTGAATCAGTTGGCATGCAGCGATATTCGATGCAGAAAATACACTATAAACGATGTTGAAGAGGCCACTAGAAAGTTCTGCCAAACATTGAAAATAGGTGAAGGTGGATATGGACCTGTGTTTAAAGGCCAACTTGATCACACCCAAGTAGCAATCAAAATTTTGAACCCTGATGCTACCCATGGCAGGAGGCAGTTCCAACAAGAGGTTGAGGTATTATGCAGCATAAGGCATCCAAACATGGTTCTCCTCATTGGTGCATGTCCTGAATATGGATGTTTAGTGTATGAGTACTTAGAGAATGGTAGCTTAGAAGATAGATTATTGATGAAAAATGATAGCCCTCCAATTCCATGGTGGAAACGTTTTGAAATAGCTGCTGAGATTGCAACTGCACTCCTTTTCCTTCACCAAACAAAGCCAGAACCAATTGTGCACAGGGACCTCAAACCTGCCAACATTCTCTTGGACAGGAATTTTGTGAGCAAAATTAGTGATGTTGGCCTTGCAAGACTAGTGCCAGCTTCTGTGGCTGATTCTGTCACACAATATCACTTGACTGCTGCTGCTGGAACCTTTTGTTACATTGATCCTGAGTACCAACAATCTGGGATGCTAACAACAAAATCAGACATATATTCATTGGGGATAATGCTTCTACAAATCATCACAGCCAAGCCTCCGATGGGGCTTGCTCACCATGTTAAGAGGGCCATTGAAGATGGAACATTTTCAGAAATGCTTGATCCTGTGATCACTAATTGGCCCCTTGAAGAGACTCTTGAATTTGCCAAACTCTCATTGAGGTGTGCAGAGCTCAGCAAAAGAGACAGGCCTGATCTTGCAACTGAGGTAGTGCCAAAGCTTAACCATTTGAGGGACTTTGGGTTAGCATCACTATCATAG 2490 0.451 MGATKLNLIDIAIPDLREVGDLMTGEPATEALVNGDHNYNGPKVAKFLFGAKWKGRRSTDKSYSRDNRLIFPKNSYRQEGLTPRCRLFATWGFPRVRLLRENVGKRGLSHFHPHTATRGPPKHKDPPKPTACLLSRRPPPSFSPRSRRWQTPATTTTTAMSSHGGTTTSQLFNVTMVAVDKGKSSGHAFRWTLKNIDNPVFIAVHVKHKNITHQGTNVFPPTEDEVANVFNPIRQLCQNNNVKLKEAVIDDSEVVRGIVEYAKKNRVNTIVIGAAHSNKNTLARTLYLRSGSKKLKGHVPTGVMKSAPDHSSVYVISKGKIVGARPAIRPMVNMVTPPSENGISENRTNTQRTGSTNGRSQRSPLLEMPRSSSVGQSMDRRLLFCRSPGESDSSRSHKLGSADGTKQECDSDSPSDSQFTAEMESEMKRLRLKLKHTMDLYNSACKETVSTQSKDKEINQRKLDEERIAEVAKLSKEAALAMAEKEKFKARAALEAAEEAIKMVEKEAQRRFHAEMKARREAHEKDRALNQLACSDIRCRKYTINDVEEATRKFCQTLKIGEGGYGPVFKGQLDHTQVAIKILNPDATHGRRQFQQEVEVLCSIRHPNMVLLIGACPEYGCLVYEYLENGSLEDRLLMKNDSPPIPWWKRFEIAAEIATALLFLHQTKPEPIVHRDLKPANILLDRNFVSKISDVGLARLVPASVADSVTQYHLTAAAGTFCYIDPEYQQSGMLTTKSDIYSLGIMLLQIITAKPPMGLAHHVKRAIEDGTFSEMLDPVITNWPLEETLEFAKLSLRCAELSKRDRPDLATEVVPKLNHLRDFGLASLS 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00523 829 Pfam Protein tyrosine and serine/threonine kinase 559 810 IPR001245 GO:0004672|GO:0006468
Phco2g00523 829 SUPERFAMILY Protein kinase-like (PK-like) 536 809 IPR011009 -
Phco2g00523 829 MobiDBLite consensus disorder prediction 335 421 - -
Phco2g00523 829 SMART serkin_6 554 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00523 829 Gene3D Transferase(Phosphotransferase) domain 1 627 824 - -
Phco2g00523 829 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 176 301 - -
Phco2g00523 829 Gene3D HUPs 160 317 IPR014729 -
Phco2g00523 829 Coils Coil 471 507 - -
Phco2g00523 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 672 684 IPR008271 GO:0004672|GO:0006468
Phco2g00523 829 ProSiteProfiles Protein kinase domain profile. 554 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00523 829 Pfam Universal stress protein family 176 301 IPR006016 -
Phco2g00523 829 PANTHER OS02G0152300 PROTEIN 175 826 - -
Phco2g00523 829 MobiDBLite consensus disorder prediction 391 405 - -
Phco2g00523 829 MobiDBLite consensus disorder prediction 406 421 - -
Phco2g00523 829 Gene3D Phosphorylase Kinase; domain 1 524 626 - -
Phco2g00523 829 MobiDBLite consensus disorder prediction 337 378 - -
Phco2g00523 829 MobiDBLite consensus disorder prediction 144 166 - -
Phco2g00523 829 MobiDBLite consensus disorder prediction 108 166 - -
Phco2g00523 829 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 527 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00523 Phco-Chr2 4883311 4892456 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Phco2g00523 PK_Tyr_Ser-Thr 2.7e-39 CL0016