Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00521 ATGGTGGCCTCCGTCGCACTCGGCGGCACTCTCACTGCGCACGATTGCCGGATTCTGATGGAGAACCTAAGGAACACATGGAAGTCTGTGATCTTGATCTTAAGTTGTTACAAGGTTAAGTGCCCCTTGGAGGAATCAGAGAAAGAGGTTTTGAAACAAGGGTCTTTCCAGAGGCTGTGTCTATCTGATGTGAGCAATTCAAGCTCCACTCAGGCCATTGAGGATCTTTCAATTTCCTTTGCTGGCTCCAAACTTTATGCATTCACACTTGAGGAGCTAAGGGAAGCAACAAGCAGTTTCTCATGGAGTAATATGCTAGGAGAAGGAGGGTTTGGACCTGTGTACAAGGGTTTTGTGGATGACAAACTTAGGCCAGGTTTGAAAGCTCAGACTGTTGCTGTGAAACGGTTGGACTTGGATGGCTTACAAGGTCACAGGGAGTGGCTGGCAGAGATTATATTTCTTGGACAACTAAGGCATCCACATCTTGTCAAGTTAATAGGGTACTGTTATGAGGATGAACACAGGCTTTTGATGTATGAATACATGCCAAGAGGCAGCTTGGAGAATCAACTCTTCCGAAGATACTCTGCTGCTATACCATGGTCAACCAGGATGAAAATTGCATTAGGAGCTGCCAAAGGTCTGGCCTTCCTTCATGAAGCAGATAAACCTGTAATATACCGCGACTTAAAAGCTTCGAACATTTTACTGGACTCAGATTTCACAGCTAAACTCTCTGACTTTGGTCTAGCCAAGGATGGCCCTGAAGGGGAAGACACATATGTAACAACACGCATAATGGGAACACAAGGATATGCTGCTCCTGAGTACATAATGACAGGTCACCTTACAACCAAGAGTGATGTGTATAGCTATGGAGTGGTGCTGTTGGAATTGCTTACGGGAAGACGAGTAGTGGATAAGTCTCGGTCGAATGGTGGCAAGAGCTTAGTGGAATGGGCAAGGCCTTTACTGAGAGATCAGAAAATAGTTTATAGCATCATAGATTGTAGACTAGAAGGGCAATTTCCCATGAAAGGAGCCATGAAAGTTGCTATGTTGGCTTTTAAATGCTTAAGTCCTCACCCAAACGCAAGGCCAACTATGAGTGATGTGGTGAAGGTGTTGGAGCCACTTCAGGACTTTGATGATGTTTTCATTGGACCATTTGTGTATGTTGCCGTGAGTGAAAATGGTAACAAACATAAAATATAG 1218 0.4458 MVASVALGGTLTAHDCRILMENLRNTWKSVILILSCYKVKCPLEESEKEVLKQGSFQRLCLSDVSNSSSTQAIEDLSISFAGSKLYAFTLEELREATSSFSWSNMLGEGGFGPVYKGFVDDKLRPGLKAQTVAVKRLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEDEHRLLMYEYMPRGSLENQLFRRYSAAIPWSTRMKIALGAAKGLAFLHEADKPVIYRDLKASNILLDSDFTAKLSDFGLAKDGPEGEDTYVTTRIMGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELLTGRRVVDKSRSNGGKSLVEWARPLLRDQKIVYSIIDCRLEGQFPMKGAMKVAMLAFKCLSPHPNARPTMSDVVKVLEPLQDFDDVFIGPFVYVAVSENGNKHKI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00521 405 Gene3D Phosphorylase Kinase; domain 1 61 182 - -
Phco2g00521 405 SMART serkin_6 100 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00521 405 SUPERFAMILY Protein kinase-like (PK-like) 77 378 IPR011009 -
Phco2g00521 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Phco2g00521 405 CDD STKc_IRAK 106 380 - -
Phco2g00521 405 Pfam Protein tyrosine and serine/threonine kinase 102 377 IPR001245 GO:0004672|GO:0006468
Phco2g00521 405 PANTHER OS01G0588500 PROTEIN-RELATED 67 381 - -
Phco2g00521 405 ProSiteProfiles Protein kinase domain profile. 100 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00521 405 FunFam Serine/threonine-protein kinase PBS1 183 386 - -
Phco2g00521 405 FunFam Serine/threonine-protein kinase BIK1 66 182 - -
Phco2g00521 405 Gene3D Transferase(Phosphotransferase) domain 1 183 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00521 Phco-Chr2 4863490 4866638 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco2g00521 PK_Tyr_Ser-Thr 1.8e-48 CL0016