Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00517 ATGAGCTTATCCAAGAAAGTATCCCAAACAGACGCTAAATTGAGCACCCCAAACAAAGCAACCTATTTGAATCCAAATGCAGCAGAGTTTGTTCCTTTTTCCTTGAGATCATCTCCATCTGGAAGCACTAGCTCAGTGGATGCAACAGCGAGGTTTACTACTGCCGCTGGATCTCTTGGTAAAGCAGTTCTAGATCGTTCAGAATCATCCATTTCGAACAATTCTGATGATGAGGCTCACCAATACTGGCGTTGTCAGCTTCCTGATGATATCACTCCTGACTTCAAGGTCATGGGAGAAGATGAATCCCAAGGTGTTAACAACCTCTCTTTAGAAGGCTTATCTATAAATAATGATAATGAATCCTCAATGTTTCCTTCTTCTAAGGGAAGTAGATATAAGTTAAATGAGCTGCAGGAATTGTCTCAACAGCACCTTAATGGCCCTTTTGCTGATAAATTAAGGTTTTCCAATTCAACCTACAGGGAGGAACCATCTTCACCAAGCATTTTGAACACATCAGCAAAGCCTTGGGATAGGCAAAATGGGAACACGGATTTGCATGTTAGCAATGGTCAAGAGGCACTTGTTTATGATGACAACTCTGGACATGGATTCTTAAATGATGTTTTTGCTGGGAATTCCCTTGTGAATGATACTGATTTGAACCCTTTGGAATTTTTAGCTTCTCTTTTTCCTGGGTTTGCTTCAGAAAGCCTTGCCGAAGTTTTCTTTGCCAATGGATGTGATTTACATCTGACCATTGAGATGCTCACTCAGTTAGAGATTCAAGTTGATGGTAGTAGCTTCAATCAGAATCTGAGTCCAAAGACTCTGTCAACTCCCAATCTGAGTGCAATGGAATTTCCAGCTCTTACTCCATCAAATATCCAAAGTACTGCAAAATATGCTGCAGATAGTGTTCAAAGTGGCAATCCTTACTTATCATCTGATAAAGACATGCTAATGTTCAAATCTAGCTCTTCTATTCCATCTAGAGGGGCTGTTGACTTTGCTTCAACTGTCAGGAAATTGGCTTCTCAGGATTCTGGTATGTGGAAGTATGATAAAAATGGTTCTGGTGATGCTTCCACTGGCTCTAGTAGAAGTTTAAATGTTCTTGCTAGTGCCTACAATGGTGGACAGGGGAGATCCAACTTTGGTGATAGATTACAGAACTGTAGTTCTGCTCAGGCAGCTCCTGTTTGGCTTGAAACCGGTGACGCAGTTGCAAATATGTATTCTGAGCTGCGGGAGGAGGCTCGTGATCATGCACGCTTGCGTAATGCTTATTTTGAGCAGGCACGACAAGCCTACCTTGTTGGCAACAAGGCCCTTGCAAAGGAGCTAAGTGTTAAAGGGCAACTGCACAACATGCATATGAAAGCTGCGCATGGAAAAGCTCAAGAATCTATTTACCGTCAGAGGAATCCTGTTGGTCCAGAGATGCAAGTTAATGGGAGGGGGCACCAGAGAATGATAGACTTACATGGTCTGCATGTAAGTGAAGCCATTCACGTGCTGAAACACGAACTGAGTGTGCTTAGAAGCACGGCCAGAGCTGCTGAGCAGCGTCTTCAGGTTTACATCTGTGTTGGCACTGGCCACCACACCCGGGGCTCGCGCACTCCGGCGAGACTTCCGATAGCTGTACAGCGATATCTACTCGAAGAAGGCCTTGATTTCACTGAACCGCAGCTGGGCCTGATTCGTGTTGTGATGTACTGA 1728 0.4398 MSLSKKVSQTDAKLSTPNKATYLNPNAAEFVPFSLRSSPSGSTSSVDATARFTTAAGSLGKAVLDRSESSISNNSDDEAHQYWRCQLPDDITPDFKVMGEDESQGVNNLSLEGLSINNDNESSMFPSSKGSRYKLNELQELSQQHLNGPFADKLRFSNSTYREEPSSPSILNTSAKPWDRQNGNTDLHVSNGQEALVYDDNSGHGFLNDVFAGNSLVNDTDLNPLEFLASLFPGFASESLAEVFFANGCDLHLTIEMLTQLEIQVDGSSFNQNLSPKTLSTPNLSAMEFPALTPSNIQSTAKYAADSVQSGNPYLSSDKDMLMFKSSSSIPSRGAVDFASTVRKLASQDSGMWKYDKNGSGDASTGSSRSLNVLASAYNGGQGRSNFGDRLQNCSSAQAAPVWLETGDAVANMYSELREEARDHARLRNAYFEQARQAYLVGNKALAKELSVKGQLHNMHMKAAHGKAQESIYRQRNPVGPEMQVNGRGHQRMIDLHGLHVSEAIHVLKHELSVLRSTARAAEQRLQVYICVGTGHHTRGSRTPARLPIAVQRYLLEEGLDFTEPQLGLIRVVMY 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00517 575 Pfam Domain of unknown function (DUF1771) 414 477 IPR013899 -
Phco2g00517 575 CDD CUE_CID7_like 222 264 IPR041806 -
Phco2g00517 575 ProSiteProfiles Smr domain profile. 494 575 IPR002625 -
Phco2g00517 575 Coils Coil 505 525 - -
Phco2g00517 575 MobiDBLite consensus disorder prediction 1 20 - -
Phco2g00517 575 SMART SMR_2 491 575 IPR002625 -
Phco2g00517 575 Gene3D - 461 574 IPR036063 -
Phco2g00517 575 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 575 - -
Phco2g00517 575 SUPERFAMILY SMR domain-like 492 573 IPR036063 -
Phco2g00517 575 SMART DUF1771_2 413 478 IPR013899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00517 Phco-Chr2 4794534 4802413 Dispersed/Wgd