Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00511 ATGGAGGAACAACACCACCCGCAGCCTAAACCCAACAGCATCAACGCTTCCGAAAGCGACCCTTTCCTCTTAAACTACACAACTTCGGATCTCCGAACGGCTTCGGAGTTTCTCGCCACGTGGCTCCCCTTCCTCTCCCGAGATCTCTGCACGCGTTGCACCCAATCTCTCTCCGATCGTATTCAGTCCATCGACCCAGGTGAAGTGCCCCAAAACAACAGCCCCAATGAACAAATCGATGCTGAAGATAACTGCGACACGCATTCTCTGGGGAGTTGGAAAGACGGGGCGGAGGTGAATACCTCTGTGGAGACTCCGAGCCAGAGAATTTGTTGGGCCGACATGGCCCAAGAGGACGATGAGTTTGGCGAAGAAGAAAACAGCAACAATGGGGTTACTGTTGTTGTGGGTGATTCGAATGATACTTCTGATGTGGGTACAGTGGTGGCTGAGAAGCCGACTTTGCCCAGGGAGCAGAGGGAGTACATTAGGTTCATGAATGTGAGGCGCCAGAAGGACTTCATCTGCTTTGAGAGGGTTAATGGGAAGCTAGTGAATATTCTTGAAGGGCTTGAACTCCACACCGGTATTTTCAGTGCTGCTGAACAGAAGCGGATTGTTAGTCATGTTGCTTCATTGCAGGAGATGGGGAAAAGAGGCGAATTGAAAGAGCGGACGTTTTCGGCTCCCCAAAAGTGGATGAGGGGCAAGGGACGACAAACCATCCAATTTGGGTGCTGTTACAATTATGCAGTGGATAGAGATGGTAACCCTCCTGGTATTCTTCCACATTCAATTGTTGATCCTATACCTGATCTTTTCAAAGTCATCATCCGGCGACTGATCAAATGGCATGTACTACCTCCTACTTGTGTGCCAGACAGTTGCATTGTTAATATATACGAAGAAGGGGACTGTATACCTCCACACATAGATAACCATGACTTTGTTCGACCATTTTGCACTGTCTCATTTCTTAGCGAGTGCAATATAGTTTTTGGATCAAACTTAAAGATTGTAGGCCCTGGTGACTTTGATGGTTCGATTGCTATTCCTTTACCTGTGGGATCTGTACTTGTCTTGAACGGAAATGGGGCTGATGTAGCCAAGCACTGTGTGCCAGCAGTTCCTTCGAGAAGGATATCAATCACATTTAGAAGAATGGATGAGTCAAGGAGGCCTTTTGGATATGTTCCTGAACCTGATCTTCAGGGAATTCAACCATTGGCCTATGAAGAAGTTGAGCAGGAAAAGAAATCTGGTGGAAACAGAGGTGGTCGTCATATGAGGAGACATAGAGACAGGAGAGGAGGTGGCAGGAATGATGCAATGGGATTTGCATCTAGAAATGATAGGTTCTCAGAGCACCGTGACTCGAATCATAGTACACCCAGATATGGAAGTAGGTGGAGTAGAAAGCCTGGTAGTTGA 1431 0.4745 MEEQHHPQPKPNSINASESDPFLLNYTTSDLRTASEFLATWLPFLSRDLCTRCTQSLSDRIQSIDPGEVPQNNSPNEQIDAEDNCDTHSLGSWKDGAEVNTSVETPSQRICWADMAQEDDEFGEEENSNNGVTVVVGDSNDTSDVGTVVAEKPTLPREQREYIRFMNVRRQKDFICFERVNGKLVNILEGLELHTGIFSAAEQKRIVSHVASLQEMGKRGELKERTFSAPQKWMRGKGRQTIQFGCCYNYAVDRDGNPPGILPHSIVDPIPDLFKVIIRRLIKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKIVGPGDFDGSIAIPLPVGSVLVLNGNGADVAKHCVPAVPSRRISITFRRMDESRRPFGYVPEPDLQGIQPLAYEEVEQEKKSGGNRGGRHMRRHRDRRGGGRNDAMGFASRNDRFSEHRDSNHSTPRYGSRWSRKPGS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00511 476 MobiDBLite consensus disorder prediction 1 20 - -
Phco2g00511 476 MobiDBLite consensus disorder prediction 61 82 - -
Phco2g00511 476 Pfam 2OG-Fe(II) oxygenase superfamily 191 386 IPR027450 -
Phco2g00511 476 MobiDBLite consensus disorder prediction 61 80 - -
Phco2g00511 476 Gene3D - 175 393 IPR037151 -
Phco2g00511 476 MobiDBLite consensus disorder prediction 449 463 - -
Phco2g00511 476 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 292 389 IPR005123 -
Phco2g00511 476 MobiDBLite consensus disorder prediction 414 476 - -
Phco2g00511 476 SUPERFAMILY Clavaminate synthase-like 187 388 - -
Phco2g00511 476 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 30 422 IPR044842 GO:0003729|GO:0006402|GO:0032451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00511 Phco-Chr2 4733163 4736500 Dispersed/Transposed