Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00509 ATGAGTAAGCAACACACGGGTGTGTGGTGTGGTGTGGTGTGGTGTGAAGAGCAACTGCTTCATTTCTGTTATCAGTTGTTTCCTCCAAATTTGGGGTCAATGGAACACAGTTTGAAAAGAAAGTCTCCAGAAAAGGGAGACAATTTACTCTTGAACAGCTTTTCTCTGGATGACCTTAATGAAGATCTCTTAGAGAGGGTGCTTTCATGGCTACCGACTTCCTCCTTCTTCCGCCTTACTTCCGTGTGCAAGAGATGGAAGTCAGCTGCTGCTTCTGTGAGTTTCAAGCTTGCCTGCTCATACATTCCCTCAAGGGATCCTTGGTTTCTGATGGTCTCTCCCAGCCTCAACCAATCTATTGTCTTTGACGCTGCTGAAAACAGTTGGAAAAAACTCAATCACTTGCGTCTTCCGCTCGAAGACTCTAACATAAACTGCATGCCTGTTGCAGCCTCTGGTGGCCTGGTTTGCTACCGCAAACTTTCAGGAAACTTTGTTGTATGCAATCCAGTGACCGGATCCAGTAGTGAACTCCCTCCACTGCATTTCCCCTCAGAAAATCAACCTCTCAATGCCGTTGTGATGAGTACAACTTTCAGAGATCAAACCTCCTACAAGATTGTGTTAGTCTTCGGTGAACTCCCTAATCTTCTGTTTAAAGTCTATGACTCAAGCTCTTGCTGTTGGGAAGATGAGACTGCACTGAGGAGGGAGGTTGATGACAATTCCATTGATTGTGATTCAATCGATGATGACCATGTTGTGTACTTCCTTAGCAAGGCTGGTACAGTGGTGGCTAGTAGCATGCAGAGGAGCCCATCTAAGCAATATTCCTCGGTTATTATTACTGACAAAGATGGTCAGGAAATGGTGTATTTCCTGAGCTCCTCAGGGACAGTAGTAGCTTGCAATTTGACATCCAGGTGCTTTTTTGAGTACCCCAGGTTGTTGCCTGTTTTCAGTGAGTACTCCATTGATATTGTGGAGTGTGGTGGTGAGATGCTGGTTGTTTTGTTATCAGAATTCTTGGAGAGCACAAGTCTTAGGGTGTGGAAATACGATGACCCGAATCGATGCTGGCAACAGATTGCTGCAATGCCTGCAGCAATGTCTCAAGAATGGTATGGAAAGAAGGCAGATATCAACTGTGTTGGATCTGGCAATCGGATATTTATATGCTTGAACTCCCCTGAGCTATGCACTTACATTCTATGTGATTTGGTGACCAACAATTGGACAGAGTTGCCGAAATGTTGCATGAATGGAGAAGTCATGGAGTTCATGTCTGCCTTCTCATTTGAGCCGAGGATAGAGGCTTGTGTATGA 1326 0.4502 MSKQHTGVWCGVVWCEEQLLHFCYQLFPPNLGSMEHSLKRKSPEKGDNLLLNSFSLDDLNEDLLERVLSWLPTSSFFRLTSVCKRWKSAAASVSFKLACSYIPSRDPWFLMVSPSLNQSIVFDAAENSWKKLNHLRLPLEDSNINCMPVAASGGLVCYRKLSGNFVVCNPVTGSSSELPPLHFPSENQPLNAVVMSTTFRDQTSYKIVLVFGELPNLLFKVYDSSSCCWEDETALRREVDDNSIDCDSIDDDHVVYFLSKAGTVVASSMQRSPSKQYSSVIITDKDGQEMVYFLSSSGTVVACNLTSRCFFEYPRLLPVFSEYSIDIVECGGEMLVVLLSEFLESTSLRVWKYDDPNRCWQQIAAMPAAMSQEWYGKKADINCVGSGNRIFICLNSPELCTYILCDLVTNNWTELPKCCMNGEVMEFMSAFSFEPRIEACV 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00509 441 CDD F-box_AtFBW1-like 57 95 - -
Phco2g00509 441 ProSiteProfiles F-box domain profile. 53 98 IPR001810 GO:0005515
Phco2g00509 441 Gene3D - 109 425 IPR015915 GO:0005515
Phco2g00509 441 Gene3D - 51 95 - -
Phco2g00509 441 SUPERFAMILY Galactose oxidase, central domain 119 416 IPR011043 -
Phco2g00509 441 PANTHER BNACNNG10540D PROTEIN 290 440 - -
Phco2g00509 441 Pfam F-box domain 56 96 IPR001810 GO:0005515
Phco2g00509 441 SUPERFAMILY F-box domain 52 111 IPR036047 GO:0005515
Phco2g00509 441 SMART fbox_2 59 99 IPR001810 GO:0005515
Phco2g00509 441 FunFam F-box only protein 13 51 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00509 Phco-Chr2 4719213 4721286 Dispersed/Wgd