Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00471 ATGTTGGCTACCATGGAACGTCTCCACAACTTTAAAACTTCTCTTCTTTTCTGCATCTTCATCATTCCAACAATAACCATAGCTCAACCACTTTCCTTCAACATAACTAACTTTAACGATACAGAAAGTGCAAGCCTTGTTGGATATGCTGGTGTAGCCAAGAGTGTGAACAGAACCATAGTGCTAAATCCTCTCATCGACAATGGAATTGGAAGAGCCATCTATGGCCTCCCTGTACGCTTCAAAAACTCTTCTAACGGGCATGTCACTGATTTTTCAACTCGTTTTTCATTCACTATCAATGTGTCCACTAAAACCAACTATGGTGACGGTTTTGCCTTCTACGTCGCACCCCTTGCCTACCCGATTCCGACGGATTCAGGTGGTGGTAGCCTCGGCCTTTACGGTGCCAACCAAAATAACATTATTGCTGTTGAATTCGACACTTTTCCAAATACTAATTCTGATCCACAAATGAAGCATGTCGGGATAAACAATAACTCTGCGGTGTCTCTCAATTCTTCCTTTTTTGATATTGACAGCAACATAGGGAACATGGGGCATGTGTTGATAACTTACAATGCTTCTGCCAAACTCCTTGCTGTCTCATGGTTCTTTGAGGGAACTAGTTCTGGTTTTGTGCCAAACACTTCTCTTTCGTACCAGATTGACCTAGGGGAAATTCTCCCCGAGTGGGTAACTGTTGGGTTTTCGGGTGCAACCGGGGCGTCTAACGAAGAGAATGTTATTCATTCCTGGGAATTCACATCAACTCTGAATTCCAAACATTTAAACAGTAAAGAAAATGATGATGGCAATGACATCACAGTTAGATTCAAGCTTCCAGTCCAAGTAGTAGCTGTTGCAGTGAGTTGTTCTATTTTGTTTATGCTCGTGGTCGTTGGTGTGTCTTCGTTTATCATCATCAAGAAGAGAAGAACCGACGATGGATTTGGTTTCGATGGAGCAGCTATGCCTAGAAGGTTTGGTTATAAGGAGTTAGTTACAGCCACCAACGGGTTTGCAGATGATAGAAGACTGGGAGAAGGAGGCAGTGGACAAGTTTACAAAGGTTTTCTGAGTGATCTAGGGCGCGTGGTTGCAGTGAAAAAGATTTTTTCTGATGTCGAAGATTCGGAAAGAATATTTAGAAACGAGGTGAAGATTATAAGTGGTCTTGTGCATCGAAACCTTGTGCAATTCATGGGGTGGTGCCATGAGCAAGGAGAGTTGTTACTGGTTTTTGAGTACATGACAAACGGAAGCCTTGACACTCATCTATTTGGCAACAAGAGAAGTTTGACATGGGGTGTGAGATACAATATAGCCTTAGGTATGGCTAGGGCACTTCGTTATCTTCATGAAGAGGTGGAGCAGTGTGTTCTTCACAGAGATATAAAGTCAAGTAATGTTTTGTTAGACAGAGATTTCAACACCAAGGTTAGTGACTTTGGGATAGCAAAGTTGGTGGATCCAAGACTGAGGACTCAGAAGACAAAGGTGGTGGGAACATATGGGTACTTGGCACCTGAATATGTGAAGGAAGGAAGGGCTAGCAAGGAGTCTGACATGTATGGTTTTGGGGTTGTGGCTTTGGAGATAGCGTGTGGAAGGAGGACTTACGAGGATGGAGAGTATAATCAGGTGCCTTTGACGAATTGGGTGTGGAAACAATATGTGGATGGAAATATTTTGAATGCTGCTGATGATGGATTGAAGGGAGGTTATGATGTGAACGAAATGACATGTTTGCTCACTGTGGGAATATGGTGTACTCACCCAGATCACAAGCAAAGGCCAAAGGCAGAACATGTTATTAATGCTCTAAAGCAAGAAACACCATTGCCAATGCTTTCACTATGA 1863 0.4283 MLATMERLHNFKTSLLFCIFIIPTITIAQPLSFNITNFNDTESASLVGYAGVAKSVNRTIVLNPLIDNGIGRAIYGLPVRFKNSSNGHVTDFSTRFSFTINVSTKTNYGDGFAFYVAPLAYPIPTDSGGGSLGLYGANQNNIIAVEFDTFPNTNSDPQMKHVGINNNSAVSLNSSFFDIDSNIGNMGHVLITYNASAKLLAVSWFFEGTSSGFVPNTSLSYQIDLGEILPEWVTVGFSGATGASNEENVIHSWEFTSTLNSKHLNSKENDDGNDITVRFKLPVQVVAVAVSCSILFMLVVVGVSSFIIIKKRRTDDGFGFDGAAMPRRFGYKELVTATNGFADDRRLGEGGSGQVYKGFLSDLGRVVAVKKIFSDVEDSERIFRNEVKIISGLVHRNLVQFMGWCHEQGELLLVFEYMTNGSLDTHLFGNKRSLTWGVRYNIALGMARALRYLHEEVEQCVLHRDIKSSNVLLDRDFNTKVSDFGIAKLVDPRLRTQKTKVVGTYGYLAPEYVKEGRASKESDMYGFGVVALEIACGRRTYEDGEYNQVPLTNWVWKQYVDGNILNAADDGLKGGYDVNEMTCLLTVGIWCTHPDHKQRPKAEHVINALKQETPLPMLSL 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00471 620 FunFam L-type lectin-domain containing receptor kinase IX.1 418 619 - -
Phco2g00471 620 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Phco2g00471 620 Pfam Legume lectin domain 31 267 IPR001220 GO:0030246
Phco2g00471 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Phco2g00471 620 SUPERFAMILY Protein kinase-like (PK-like) 323 609 IPR011009 -
Phco2g00471 620 Gene3D - 29 273 - -
Phco2g00471 620 PANTHER - 57 612 - -
Phco2g00471 620 Pfam Protein kinase domain 342 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00471 620 CDD lectin_legume_LecRK_Arcelin_ConA 31 259 IPR001220 GO:0030246
Phco2g00471 620 ProSitePatterns Legume lectins beta-chain signature. 143 149 IPR019825 -
Phco2g00471 620 ProSitePatterns Legume lectins alpha-chain signature. 229 238 IPR000985 -
Phco2g00471 620 Gene3D Transferase(Phosphotransferase) domain 1 418 618 - -
Phco2g00471 620 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 264 IPR013320 -
Phco2g00471 620 FunFam L-type lectin-domain containing receptor kinase IX.1 326 417 - -
Phco2g00471 620 SMART serkin_6 341 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00471 620 ProSiteProfiles Protein kinase domain profile. 341 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00471 620 ProSitePatterns Protein kinases ATP-binding region signature. 347 371 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00471 Phco-Chr2 4253951 4255813 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco2g00471 Pkinase 5.3e-50 CL0016