Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00469 ATGGAACCAGGTGCAAAACTCTCAAACAGCATACGAAGCCGCAGCTCTCCTGTATCAAATTTAGAGTTTAGATGCAGATTCTTCGGGAGTATAGATAAGTGGAAGAGACCATGGAAAACAGAATTGGAGGAGGAAGCTGTAGGTGCAGGGGAGGTTCTGTTCTTTTCTGAAGCTGAAGATGCCTTCCACAAGGTTCAACAAGTACAAACCACACGCAACTTCAAGGAGAGGGAGGGAGCATTTATTGGTGTAGAATTGTTGAAGCAAAGTTTTTCCCTTAGGTTTCGGGGTGAATCATCTTCTTCCGTGTCTTCCCTGCAACCTGCAAATACATATAAGGCAATCCCGAACTTGCATCCTTGTACCCAGTATACTCTGTCAAATAAATCATGCCTCATTGGATACGCAGGCGTAGCCAAGATTGAGAACGGAAGCATACTGCTCAACTCACTCATCTATAGTGGAATTGGAAGAGCAGTCTATGGCCAACCTCTCCACCTCAAAAACTCTTCTAACGGAAAAATCACTGATTTTTCAACTCGTTTTTCATTCACTATTCAATCCCCTTACACCATTTACGGTGACGGATTTGGCTTCTACGTCGCACCTCTTTCGTACCAGATTCCGAACACCATGATGCCTGCAGGTTACGGTCTCGGCCTATACGATGAAAACATACCCATACTTGCTGTCGAATTTGACACTTTTATAAACGACTTCGACCCACCAGTGCAGCACGTAGGGATCAACAATGGCTCTGTGGTTTCTCTCAATTATACCAAGTTTGATATTGAGAGCAACAGAGGGAACATGGGGCATGCGTTGATAACTTACAACGCTTCTGCCGAACTCCTTGCTGTCTCGTGGTTCTTTGATGAAACTAGTTCCGCTTCTACTCCTGACGCTTATCTTTCGTACCAGATCGACCTAGCGGAACTTCTACCGGAGTGGGTCGCTATTGGTTTTTCAGGTGCAACCGGATCATCCATTGAGGAAAATGTTATCCATTCATGGGAATTCAATTCTAGTCTAGATCTAATAAATTTCAAGCATAGAGAGGCAAACAAAGAAACTGTAATCAAAATTGAATACAAGGGTCGGGGAAAAGTAGTGGTTGTTGCAGTGATTTGGTCCATTATATTTGCGCTCGTGGTTATTAGTATTACGTGTTGGATGATGAAGAAGAGAAGAAACGAGGATGGGTTTGGTTTTGACAGAGAAGCTACGCCTAGAAGGGATTTCAATGCAAAGCTTAGTGATTTTGGAATGGCGAAGTTGGTGGATCCAAGATTGAGGAGTGAGAAGACAAGGGTGGTGGGGACATATGGGTACCTGGCCCCTGAATATGTGAAGGAAGGAAGGGCTAGCAAGGAATCAGACATGTACAGTTTTGGGGTGTTGGCTTTGGAAATAGCATGTGGAAGGAGGACTTACCAGGATGTAGAGTATAATCAGGTGCCTCTGAGGAATTGGGTATGGAAACATTATGTGGATGGAAAGATTTTGAATGCTGCTGATGAGAAATTGAAGAAGGATTTTGATGTGAGTGAAATAACATGCTTGCTCACTGTGGGAATATGGTGTACCCTGGAAGATCACAAGGAAAGACCAACAGCAGAAGAGGTTATTAATGTTCTTCAACAAAAAGTGTCATTGCCAATGCTTTCTACTAAACATCCCTGA 1683 0.4349 MEPGAKLSNSIRSRSSPVSNLEFRCRFFGSIDKWKRPWKTELEEEAVGAGEVLFFSEAEDAFHKVQQVQTTRNFKEREGAFIGVELLKQSFSLRFRGESSSSVSSLQPANTYKAIPNLHPCTQYTLSNKSCLIGYAGVAKIENGSILLNSLIYSGIGRAVYGQPLHLKNSSNGKITDFSTRFSFTIQSPYTIYGDGFGFYVAPLSYQIPNTMMPAGYGLGLYDENIPILAVEFDTFINDFDPPVQHVGINNGSVVSLNYTKFDIESNRGNMGHALITYNASAELLAVSWFFDETSSASTPDAYLSYQIDLAELLPEWVAIGFSGATGSSIEENVIHSWEFNSSLDLINFKHREANKETVIKIEYKGRGKVVVVAVIWSIIFALVVISITCWMMKKRRNEDGFGFDREATPRRDFNAKLSDFGMAKLVDPRLRSEKTRVVGTYGYLAPEYVKEGRASKESDMYSFGVLALEIACGRRTYQDVEYNQVPLRNWVWKHYVDGKILNAADEKLKKDFDVSEITCLLTVGIWCTLEDHKERPTAEEVINVLQQKVSLPMLSTKHP 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00469 560 SMART serkin_6 306 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00469 560 CDD lectin_legume_LecRK_Arcelin_ConA 133 344 IPR001220 GO:0030246
Phco2g00469 560 Gene3D - 123 358 - -
Phco2g00469 560 Gene3D Transferase(Phosphotransferase) domain 1 398 559 - -
Phco2g00469 560 PANTHER - 139 396 - -
Phco2g00469 560 ProSiteProfiles Protein kinase domain profile. 260 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00469 560 ProSitePatterns Legume lectins beta-chain signature. 229 235 IPR019825 -
Phco2g00469 560 ProSitePatterns Legume lectins alpha-chain signature. 314 323 IPR000985 -
Phco2g00469 560 FunFam Lectin-domain containing receptor kinase A4.3 411 560 - -
Phco2g00469 560 Pfam Legume lectin domain 132 345 IPR001220 GO:0030246
Phco2g00469 560 Pfam Protein kinase domain 415 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00469 560 SUPERFAMILY Protein kinase-like (PK-like) 412 547 IPR011009 -
Phco2g00469 560 SUPERFAMILY Concanavalin A-like lectins/glucanases 135 351 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00469 Phco-Chr2 4237577 4242509 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco2g00469 Lectin_legB 3e-50 CL0004