Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00468 ATGAGGTTGCTAGAGAAGGTGACAACTTTTGTTCTTCTACTGGCTCTTCATCTTCCTTTCCTTAAAACTGTAGAATCACTAAATTTCAACATAACAAACTTCAACGATCCTGAGAGTGCAAAAAACATGGCATACGTGGGTGATGGCCAAGCCACCAACGGCACCATAGAACTCAACATTGTGACCTATCTTTTCCGCGTTGGAAGAGCCTTGTACGCAAAACCTCTGCACCTGTGGGACGCATCTTCGAGTGTTCTCACAGACTTCACCACACGCTTCACTTTCACCATTGAGAGAGCCACCAACGGCACCTATGCTGACGGTTTCGCCTTCTACATGGCCCCTCATGGCTACCAGATTCCTCCCAACGCAGCTGGTGGCACTTTTGCCCTTTTCAACACCACCTCCAATACCTTTATTCCCCATAACCACGTCCTCACGGTTGAGTTTGACACACTTAATGGCACCATTGACCCTCCCATGCAGCACGTTGGCATAGACGATAACTCTCTCAAATCTGTGGCTTTTGCCAAGTTTGACATTGACAAAAACCTGGGAAAGAAATGTAACGTTTTGATAACCTACACTGCTTCCAACAAGACCCTCTTTCTGGCTTGGTCCTTCAACGGAACAGCAAATTCACACTCCAATTCTTCACTTTCTTACAAGATTGACCTCATGGAAATTCTACCCGAGTGGGTGGATGTTGGGTTCTCTGCTTCAACAGGCGACTTCACTGAGCACAACGTTATTTACTCGTGGGAGTTTAGTTCAACGTTGAATTCCGATGCTATGGATAATTTCTCCGGTGAGGGGAACGGTGGGAGCGGAAAACGAAACGTTTTGGTGGTTGCTGTGGCGACTTCTTCAACGGTCTTGGTGTTCGTGGTTGCTAGTATTGCAGTTTGGGTGATGATCAGGAGGAAAAGAAGGGATACGGTTGATAAGAGTAATGATGGTGAAGGTGGAGCCAACTCGGTTAAGTTTGACTTGGATAGGGCAACTATACCAAGAAGGTTTAATTACAAAGAACTAGTCGCAGCCACCAACGGATTCGCAGATGATAGAAAGCTTGGACGAGGAGCCTCCGGACAGGTTTACAAAGGGCTTCTGAGTTATTTAGGAAGGGTTGTTGCTGTGAAAAGGATTTTCGCCAACTTCGCAAATTCAGAGAGAGTTTTCATTAATGAGGTTAGGGTCATAAGCCGTCTTATACACAGAAACTTGGTGCAGTTCGTAGGGTGGTGCCACGAGCAAGGTGAGTTTTTGTTGCTTTTTGAGTACATGCCTAATGGAAGCCTCGACACTCATCTCTTTGGGGACAAAAAACCTTTGACCTGGGATGTTAGGTACAAGGTAGCATTAGGAGTGGCTGCAGCAGTTCGTTATCTTCATGAAGATGCAGAGCAGTCTCTTGAGATTGCATGTGGAAGGAGAACTTACAAAGATGGAGAGTTTCATGTGCCTCTCACGCATTGGGTGTGGCAACACTATGTTGAAGGGAATGTCATGGATGTTGTTGATGAGAGATTGAACATGGAGTTTGATGTGGATGAAATGAGAAGCTTGATCATTGTGGGGTTGTGGTGTACTAACCCTAATGACAAGGAAAGGCCAAAGGCTGCACAAGTAATAAAAGTTCTTCAGCTAGAAGCGCCATTGCCAGAGCTTCCACTTGATATGCATGACCATCTTCCTCTAGTCACAGATTCACAACAAATTAATTCTCAGTCCATGCAGGCGCTACCTTTCACTGACAGCTTTATAACTGTTGGACGTTAG 1782 0.4557 MRLLEKVTTFVLLLALHLPFLKTVESLNFNITNFNDPESAKNMAYVGDGQATNGTIELNIVTYLFRVGRALYAKPLHLWDASSSVLTDFTTRFTFTIERATNGTYADGFAFYMAPHGYQIPPNAAGGTFALFNTTSNTFIPHNHVLTVEFDTLNGTIDPPMQHVGIDDNSLKSVAFAKFDIDKNLGKKCNVLITYTASNKTLFLAWSFNGTANSHSNSSLSYKIDLMEILPEWVDVGFSASTGDFTEHNVIYSWEFSSTLNSDAMDNFSGEGNGGSGKRNVLVVAVATSSTVLVFVVASIAVWVMIRRKRRDTVDKSNDGEGGANSVKFDLDRATIPRRFNYKELVAATNGFADDRKLGRGASGQVYKGLLSYLGRVVAVKRIFANFANSERVFINEVRVISRLIHRNLVQFVGWCHEQGEFLLLFEYMPNGSLDTHLFGDKKPLTWDVRYKVALGVAAAVRYLHEDAEQSLEIACGRRTYKDGEFHVPLTHWVWQHYVEGNVMDVVDERLNMEFDVDEMRSLIIVGLWCTNPNDKERPKAAQVIKVLQLEAPLPELPLDMHDHLPLVTDSQQINSQSMQALPFTDSFITVGR 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00468 593 ProSitePatterns Legume lectins alpha-chain signature. 230 239 IPR000985 -
Phco2g00468 593 Pfam Legume lectin domain 26 265 IPR001220 GO:0030246
Phco2g00468 593 PANTHER - 472 552 - -
Phco2g00468 593 CDD lectin_legume_LecRK_Arcelin_ConA 27 260 IPR001220 GO:0030246
Phco2g00468 593 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Phco2g00468 593 ProSiteProfiles Protein kinase domain profile. 352 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00468 593 Gene3D - 24 269 - -
Phco2g00468 593 Gene3D Phosphorylase Kinase; domain 1 322 428 - -
Phco2g00468 593 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Phco2g00468 593 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 260 IPR013320 -
Phco2g00468 593 Gene3D Transferase(Phosphotransferase) domain 1 472 563 - -
Phco2g00468 593 FunFam L-type lectin-domain containing receptor kinase IX.1 337 428 - -
Phco2g00468 593 Pfam Protein kinase domain 353 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00468 593 SUPERFAMILY Protein kinase-like (PK-like) 340 559 IPR011009 -
Phco2g00468 593 Gene3D Transferase(Phosphotransferase) domain 1 429 471 - -
Phco2g00468 593 FunFam L-type lectin-domain containing receptor kinase IX.1 25 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00468 Phco-Chr2 4225193 4227563 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco2g00468 Lectin_legB 4.7e-63 CL0004