Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00466 ATGTTGGCAACCTTTGAAAATTTCCACTACTTGAAAACTTTTCTTCTTTTGTTCATCCTCTTTATCCTTCCAATAAACTTAGTTCAACCATTTTCCTTCAGCATAACTAACTTTAACGACACTGAAAGTGCAAGCATCGTTGGATACGCAGGCGTGGCCAAGATTGAGAACGGATCTGTAGTGCTCAACCCACTCATCGGCAATGGAGTTGGAAGAGCCATCTATGGCCAACCTCTTCGCCTCAAAAACTCTTCTAACGGACATGTCACTGATTTTTCAACTCGGTTTTCATTCACTATCGACGTACCTTCAGGAACCAAGTACGGTGATGGCTTTGCCTTCTACTTGGCACCCATTGCTTACCAGATTCCGACCACCACTGACGATGGCTCCCTTCTCGGCCTATACGATGACACCCAAAATAACATCCTTGCTGTCGAATTTGACACTTATGTAAACGAGTTAGACCCACCAATGCAACACGTAGGGATCAACAATAACTCTGTGGCATCTCTCAACTATACCAAGTTTGATATTGAGAGCAACACAGGGAAGATGGGGCATGCGTTGATAACTTATAATGCTTCTGCCAAACTCCTGGCTGTTTCGTGGTTATTTGATGGAACTAGTTCTGCTTCTACTCCTAGCGATTATCTTTCGTACAAGATTGACCTGTGGGCAATTTTACCGGAGTGGGTCAATGTTGGGTTTTCGGGTTCAACTGGGTCGTCCACTGAGAAAAATGTGATCCATTCCTGGGAGTTCAGTTCAAGCCTAGATATAAATTCTACGCATGCAGAGGAAAACAAAGAAAATGGCATCGCAACCAAATGCAAGGTTCAGGTCAAAGTAGTAGTTGTTACAGTGGTTTGTTCTATTGTTTTTGCGGTCGTGGTTATTACTATTTCTTGGTTGACCATCAAAAAGAGAAGAACGGAGGATGGTTTTGGTTTCGATAGAGAAGTTATGCCTAGAAGGTTTGGTTATGGCGAAATAGTTTCAGCCACCAACGGGTTTGCAGATGATAGAAGGCTGGGAGAAGGAGGCTCTGGACAAGTTTACAAAGGGTTTCTGAATGATGAAGGGCGCGTGGTTGCTGTGAAAAGGATTTTTTCTGATGTTGAAGATTCTGAGAGAATATTTAGAAACGAGGTGAAGATTATAAGTCGTCTTATACATAAAAACCTTGTGCAATTCATGGGGTGGTGCCACGAGCAAGGGGAGCTGTTACTGGTTTTTGAGTACATGAGTAATGGAAGCCTTGACAATCATCTTTTTGGAAACAGAAGACGTTTGACATGGGATTTGAGGTACAAGATAGCATTAGGTGTGGCTAGAGCACTTCGTTATCTTCATGAAGACGCAGAGCAGTGTGTTCTTCATAGGGATATAAAGTCAGGTAATGTTTTGTTGGACACAGATTTCAATACAAAGATTAGTGACTTTGGGATAGCAAAGTTGGTGGATCCAAGATTGAGGACTCAGAAGACAAGGGTGGTGGGAACATATGGGTACCTAGCTCCAGAATATATAAACGAAGGGAGGGTTAGCAAAGAATCAGACATGTACGGTTTTGGGGTTTTGGCTTTGGAGATAGCATGTGGAAGGAGGACTCACCAGGATGGGGAAAGTAATCATGTGCCTTTGGCGAAATGGGTATGGAAAAATTATGTGGATGGAGAGATTTTGAATGCTGCTGATGAGGAATTGAAGATGGATTTTGATGTAAATGAAATGAGATGTTTACTCACTGTGGGAATATGGTGTACCCTTCAAGACCACAAGGAAAGGCCAACCTCAGAACAGGTTATAAATGTTCTAAACCAAGAAGTGCCATTGCCAATGTTTTCTGCAAAACTCTCTGATATTGGGCAACCGGATTCCCTTGGATCGTCATCCAGAAAAGCATAA 1911 0.4254 MLATFENFHYLKTFLLLFILFILPINLVQPFSFSITNFNDTESASIVGYAGVAKIENGSVVLNPLIGNGVGRAIYGQPLRLKNSSNGHVTDFSTRFSFTIDVPSGTKYGDGFAFYLAPIAYQIPTTTDDGSLLGLYDDTQNNILAVEFDTYVNELDPPMQHVGINNNSVASLNYTKFDIESNTGKMGHALITYNASAKLLAVSWLFDGTSSASTPSDYLSYKIDLWAILPEWVNVGFSGSTGSSTEKNVIHSWEFSSSLDINSTHAEENKENGIATKCKVQVKVVVVTVVCSIVFAVVVITISWLTIKKRRTEDGFGFDREVMPRRFGYGEIVSATNGFADDRRLGEGGSGQVYKGFLNDEGRVVAVKRIFSDVEDSERIFRNEVKIISRLIHKNLVQFMGWCHEQGELLLVFEYMSNGSLDNHLFGNRRRLTWDLRYKIALGVARALRYLHEDAEQCVLHRDIKSGNVLLDTDFNTKISDFGIAKLVDPRLRTQKTRVVGTYGYLAPEYINEGRVSKESDMYGFGVLALEIACGRRTHQDGESNHVPLAKWVWKNYVDGEILNAADEELKMDFDVNEMRCLLTVGIWCTLQDHKERPTSEQVINVLNQEVPLPMFSAKLSDIGQPDSLGSSSRKA 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00466 636 Gene3D Transferase(Phosphotransferase) domain 1 416 622 - -
Phco2g00466 636 SMART serkin_6 339 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00466 636 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Phco2g00466 636 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Phco2g00466 636 CDD lectin_legume_LecRK_Arcelin_ConA 31 259 IPR001220 GO:0030246
Phco2g00466 636 FunFam L-type lectin-domain containing receptor kinase IX.1 29 273 - -
Phco2g00466 636 Gene3D Phosphorylase Kinase; domain 1 324 415 - -
Phco2g00466 636 SUPERFAMILY Protein kinase-like (PK-like) 323 615 IPR011009 -
Phco2g00466 636 ProSiteProfiles Protein kinase domain profile. 339 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00466 636 Gene3D - 29 283 - -
Phco2g00466 636 ProSitePatterns Legume lectins alpha-chain signature. 229 238 IPR000985 -
Phco2g00466 636 Pfam Protein kinase domain 340 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00466 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Phco2g00466 636 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 263 IPR013320 -
Phco2g00466 636 FunFam L-type lectin-domain containing receptor kinase IX.1 416 617 - -
Phco2g00466 636 Pfam Legume lectin domain 32 268 IPR001220 GO:0030246
Phco2g00466 636 PANTHER - 51 611 - -
Phco2g00466 636 FunFam L-type lectin-domain containing receptor kinase IX.1 324 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00466 Phco-Chr2 4208232 4210142 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco2g00466 Pkinase 5.5e-51 CL0016