Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00465 ATGAGGTTGCTAGAGAAGGTGACAACTTTTGTTCTTCTACTGGCTCTTCATCCTCCTTTCCTTAAAACTGTAGAATCACTAAATTTCAACATAACAAACTTCAATGATCCTGAGAGTGCAAAAAACATGGCATACGTGGGTGATGGCCAAGCCACCAACGGCACCATAGAACTCAACATTGTGACCTATCTTTTCCGCGTTGGAAGAGCCTTGTACGCAAAACCTCTGCACCTGTGGGATGCATCTTCGAGTGTTCTCACAGACTTCACCACACGCTTCACTTTCACCATTGACAGAGCCACCACCAACGGCAGCTATGCTGACGGTTTCGCCTTCTACATGGCTCCTCATGGCTACCAGATTCCTCCCAACGCAGCTGGTGGCACTTTTGCCCTTTTCAACACCACCTCCAATACCTTTATTCCCCATAACCACGTCCTCGCGGTTGAGTTTGACACATTTAATGGCACCATTGACCCACCCATGCAGCACGTTGGCATAGACGATAACTCGCTCAAATCCGTGGCTTTTGCCAAGTTTGACATTGACAAAAACCTGGGAAAGAAATGTAACGTTTTGATAACCTACACTGCTTCCAACAAGACCCTCTTTGTGGCTTGGTCCTTCAACGGAACAGCAAATTCGCACTCTAATTCTTCACTTTCTTACAAGATTGACCTCATGGAAATTCTACCCGAGTGGGTGGATGTTGGGTTCTCTGCTTCAACAGGCGAGTTAACTGAGCACAACGTTATTTACTCGTGGCAGTTTAGTTCAACGTTGAATTCCGATGCTACGGATAATTCCTCGGGTGAGGGGAATGGTGGGAACGGAAAACGAAACGTTTTGGTGATTGCTGTGGCGACTTCTTCAACGGTCTTGGTGGTCTTGGTTGCGAGTATTGCAGTTTGGGTGATGATCAGGAGGAAAAGAAGGGATACGGTTGATAAGAGTAATGATGGTGAAGGTGGAGCCAACTTGGTTAAGTTTGACTTGGATAGGGCAACTATACCAAGAAGGTTTGATTACAAAGAACTAGTCGCAGCCACCAACGGATTCGCAGATGATAGAAAGCTTGGACGAGGAGCGTCGGGACAGGTTTACAAAGGGCTTCTGAGTGATTTAGGAAGGGTTGTTGCTGTGAAAAGGATTTTCGCCAAATTCGCAAATTCAGAGAGAGTTTTCATCAATGAGGTCAGGGTCATAAGCCGTCTTATACACAGAAACTTGGTGCAGTTCGTAGGGTGGTGCCACGAGCAAGGTGAGTTTTTGTTGCTTTTTGAGTACATGCCTAATGGAAGCCTCGACACTCATCTCTTTGGGGACAAAAAACCTTTGAGCTGGGATGTTAGGTAA 1356 0.4617 MRLLEKVTTFVLLLALHPPFLKTVESLNFNITNFNDPESAKNMAYVGDGQATNGTIELNIVTYLFRVGRALYAKPLHLWDASSSVLTDFTTRFTFTIDRATTNGSYADGFAFYMAPHGYQIPPNAAGGTFALFNTTSNTFIPHNHVLAVEFDTFNGTIDPPMQHVGIDDNSLKSVAFAKFDIDKNLGKKCNVLITYTASNKTLFVAWSFNGTANSHSNSSLSYKIDLMEILPEWVDVGFSASTGELTEHNVIYSWQFSSTLNSDATDNSSGEGNGGNGKRNVLVIAVATSSTVLVVLVASIAVWVMIRRKRRDTVDKSNDGEGGANLVKFDLDRATIPRRFDYKELVAATNGFADDRKLGRGASGQVYKGLLSDLGRVVAVKRIFAKFANSERVFINEVRVISRLIHRNLVQFVGWCHEQGEFLLLFEYMPNGSLDTHLFGDKKPLSWDVR 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00465 451 Gene3D - 24 272 - -
Phco2g00465 451 Gene3D Phosphorylase Kinase; domain 1 338 429 - -
Phco2g00465 451 PANTHER - 53 451 - -
Phco2g00465 451 FunFam L-type lectin-domain containing receptor kinase IX.1 338 429 - -
Phco2g00465 451 CDD lectin_legume_LecRK_Arcelin_ConA 27 261 IPR001220 GO:0030246
Phco2g00465 451 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Phco2g00465 451 Pfam Protein kinase domain 354 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00465 451 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 261 IPR013320 -
Phco2g00465 451 ProSiteProfiles Protein kinase domain profile. 353 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00465 451 FunFam L-type lectin-domain containing receptor kinase IX.1 25 274 - -
Phco2g00465 451 Pfam Legume lectin domain 26 268 IPR001220 GO:0030246
Phco2g00465 451 ProSitePatterns Legume lectins alpha-chain signature. 231 240 IPR000985 -
Phco2g00465 451 SUPERFAMILY Protein kinase-like (PK-like) 336 450 IPR011009 -
Phco2g00465 451 ProSitePatterns Legume lectins beta-chain signature. 147 153 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00465 Phco-Chr2 4198169 4199524 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco2g00465 Lectin_legB 2.9e-65 CL0004