Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00464 ATGACAGACAACAATCCAAGACCACCACCTGATACACCTGACAGTGATGATTTCTGCAACCAGTGGCCTTTTGAGCTCTCTGAGTACTTGCAATTGGATGATGACCAATGGATGCATGATGATTTTGAGTCTTTTTCTTCGGAGAATAATGTCTCAAACCAGGTTCATCTAGGTGGGTCTGGCGGAGGTGGAAGCTACTTTGAAGGGTCTTCTAGCAGAGATCCTAGTGGACGTGAGAATAGGCAAGTTGTTAGAGAGAGAGTTGCATTCAAAACAATTTCAGAGATTGAAGTACTAGACGATGGATACAGATGGAGGAAGTACGGAAAGAAAATGGTGAAGAACAACCCCAATCCAAGGAATTACTATAGATGTTCAGTGGATGGATGCTCTGTGAAGAAGAGAGTGGAGAGAGATAAGGATGATCCTAGGTGTGTAATAACAACCTACGAAGGCAGCCACACTCATCCAAAGTTTCGAGTTTGGCGGTATGAGAGCGACTCTGTGGACGGTAAGGGCATAACGGTGGGATTGTTCAATTCAATCAATGTGGAATTTGAAGGTAAGGGTGGTGGTTGTCTCGTTTTGTGTAGTGTGGATGCCCATGGTGGGTGCTTCCATGTTTGTTTTAAAGTTTGGAAGTTTGAGCATGTCTTGAAGCATCCTACCAAAAATTGTGAAGTCTTGAATATGTTTCCTACGTGTTTGAAGTGGGAAGATGTTGGTGTTGAGGCAAAAACAATTTCAGCTTCATTTAAGGGTAACTTGGCAAAAGAGGTAGCTCTGGAGAACAAAGTTATATTGGAGATAAACAAAATTTTTGTTGCTGAAAAGGAAAGGCAGGCCCTTTCAAGAGCACAATATGGTGGTTCTAAGGAGCAGCGATGA 888 0.4279 MTDNNPRPPPDTPDSDDFCNQWPFELSEYLQLDDDQWMHDDFESFSSENNVSNQVHLGGSGGGGSYFEGSSSRDPSGRENRQVVRERVAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCSVKKRVERDKDDPRCVITTYEGSHTHPKFRVWRYESDSVDGKGITVGLFNSINVEFEGKGGGCLVLCSVDAHGGCFHVCFKVWKFEHVLKHPTKNCEVLNMFPTCLKWEDVGVEAKTISASFKGNLAKEVALENKVILEINKIFVAEKERQALSRAQYGGSKEQR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00464 295 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 54 158 IPR044810 GO:0003700
Phco2g00464 295 MobiDBLite consensus disorder prediction 51 83 - -
Phco2g00464 295 MobiDBLite consensus disorder prediction 1 20 - -
Phco2g00464 295 Pfam WRKY DNA -binding domain 100 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco2g00464 295 SUPERFAMILY WRKY DNA-binding domain 92 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco2g00464 295 SMART WRKY_cls 99 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco2g00464 295 Gene3D WRKY domain 86 152 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco2g00464 295 FunFam WRKY transcription factor 57 85 159 - -
Phco2g00464 295 MobiDBLite consensus disorder prediction 51 73 - -
Phco2g00464 295 ProSiteProfiles WRKY domain profile. 94 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00464 Phco-Chr2 4188106 4192270 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco2g00464 WRKY 2e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00464 2 4188106 4192270 Phco2g00464 2 4188106 4192270 ECH