Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00458 ATGAGTTTCAAGAACAGCCCTAAAATTCAGCACAAGGGAGACTCTCCTTACCTGTCTCGACAGTCATCCAACCCTAGCGGTAGGGCCAAACCACAGAAGAATGTGGAGCCATCAAGCCCTCTACTTGTAGGGTGCTGCAGAGGCTTCACCAATAGTAAGACTACAGGCTCCTCTGCTTCCACATCTCCACAACATCCAAAACAGCTACAGTACCAAAGATTACTGCAAAAGGTGGAAGATTTGGAAAAGGAAGTGATGAAGCAAAGAGAAGTAGGAGTGATGTACAAGAGAAGAATGGAAAGAGCACAAGACTACTTAAGACACTGCCTTCAAATAGCACAAGAAAATGGAATATTGGATCTCACTCTCAACTACAATGGTGATTTTCAACAATCTCCACTCTCTCTTCACTCCATTTCCAGCCCTCAAATTCCCACTTCTCCTCCACACCATGCCCACCACCCCAATCTTGCAACCATTATTCATCAAGCTAAAACCAATGGCTGGTACATTCATCCAAATGAGATTAAATTGGAAGAGAAAATTGGGGAAGGAAGCACCGCAGAGATTCACAGAGGAACATGGCGTGGATTTGAGGTCGCAGTGAAATGCATATCGCAAGACTTTTTCCGTATAAACCAAAACGGCGTCGTTTACTTTTCCCAGGAGCTCGAAACGCTGTCGCGGCAGCGCCACAGGTTCGTGCTTCAGCTCATGGGCGCGTGCATCGAACCTCCCCACCACGCGTGGGTGGTCACGGAGTACCTGAGCACCACGCTGAAGGAGTGGCTCCATGGGCCTGGGAACCGGCGCAGGGAGCGGATGGTGCCACTTCCACCCTTGCAAGAGAGAGTGGGCCGGGCCTTGGAAATAGCCCTAGCCATGCAGTACTTGCACGAGCAAAAGCCCAAACTCGTTCACCGCGACTTGAAGCCCAGCAACATTTTTCTTGATGACGCCATGCACGTTAGAGTCGCGGATTTTGGCCACGCGCGGTTCTTGGGTGACGAAGAAATGGCCCTAACTGGAGAAACAGGAACATACGTTTACATGGCACCAGAGGTGATCCGATGTGAACCTTACAATGAAAATTGTGATGTATACAGTTTTGGTATCATACTGAACGAGCTACTCACTGGAAATTACCCTTATGTTGAGACAGAATATGGTCCCACCAAGATTGCCATGGAAGTTGTGGAGAGTAACCTTCGACCTAAGCTTCCATCTGATGATGATGTTGGAAAACTGGGAGACCTTCTTCACCTTATTTCTCTTTGTTGGGACCAAAATCCAACTACTCGACCATCCTTTGCTACAATCACCCTTTCGCTCAAAACTTATGCCAAAAACAACTTCGTTTAG 1362 0.4787 MSFKNSPKIQHKGDSPYLSRQSSNPSGRAKPQKNVEPSSPLLVGCCRGFTNSKTTGSSASTSPQHPKQLQYQRLLQKVEDLEKEVMKQREVGVMYKRRMERAQDYLRHCLQIAQENGILDLTLNYNGDFQQSPLSLHSISSPQIPTSPPHHAHHPNLATIIHQAKTNGWYIHPNEIKLEEKIGEGSTAEIHRGTWRGFEVAVKCISQDFFRINQNGVVYFSQELETLSRQRHRFVLQLMGACIEPPHHAWVVTEYLSTTLKEWLHGPGNRRRERMVPLPPLQERVGRALEIALAMQYLHEQKPKLVHRDLKPSNIFLDDAMHVRVADFGHARFLGDEEMALTGETGTYVYMAPEVIRCEPYNENCDVYSFGIILNELLTGNYPYVETEYGPTKIAMEVVESNLRPKLPSDDDVGKLGDLLHLISLCWDQNPTTRPSFATITLSLKTYAKNNFV 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00458 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Phco2g00458 453 Gene3D Transferase(Phosphotransferase) domain 1 258 452 - -
Phco2g00458 453 Coils Coil 71 91 - -
Phco2g00458 453 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 59 444 - -
Phco2g00458 453 ProSitePatterns Protein kinases ATP-binding region signature. 182 203 IPR017441 GO:0005524
Phco2g00458 453 Pfam Protein kinase domain 178 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00458 453 SUPERFAMILY Protein kinase-like (PK-like) 147 440 IPR011009 -
Phco2g00458 453 Gene3D Phosphorylase Kinase; domain 1 155 257 - -
Phco2g00458 453 ProSiteProfiles Protein kinase domain profile. 176 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00458 453 CDD STKc_MAP3K-like 182 444 - -
Phco2g00458 453 SMART serkin_6 176 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00458 453 MobiDBLite consensus disorder prediction 15 33 - -
Phco2g00458 453 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00458 Phco-Chr2 4110369 4117049 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Phco2g00458 Pkinase 1e-43 CL0016