Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00436 ATGGGTGCATCTGGAAAATGGGTGAAGGCGTTGATCGGACTTAACACCAAGAACGAACTTGGGGGGAAGAAGAAGAAGTGGAGGCTGTGGAAGAGTTCTTCTGCAGGGGAGAACAGATCTCAAGACTTCGACTATGGCAGTGTTGCTTCCGATTCTTTCACCGCTGCAGTGGCCACAGTTGTCAGAGCTCCACCTAAGCATTTCAAACTCCTCAAGAAAGAATGGGCTGCCACCCGAATCCAAACTGCTTTCCGCGCCTTCTTGGCAAGAAGGGCATTGAGGGCGTTGAAGGGAGTGGTGAGGCTTCAAGCTCTTGTGAGGGGTAGACTTGTGAGGAAGCAGGCTGCAGTCACATTGAGGTGCATGCAGGCCTTGGTTCGTGTCCAGGCACGTGTGAGGGCGCGGCGCGTGCGAATGTCCATGGAGGGCCAAGCAGTGCAAAACATGCTCAATGAACGCCGCACCAAGGCTGAACTCTACAAGGAAGCTGAGGATGGTTGGTGTGATATCAAAGGATCATTGGAAGATGTCAAGACAAAACTACAAATGAGGCAAGAGGGAGCTTTCAAGAGGGAGAGAGCAATTGCATACTCTCTTGCCCACAAGCAATGGAGATCAACACCCTTTTCAAATTCAAGAGCAAACACCTCTCTCAAGAAGCAAGAGATAGACAAGGCTAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCAAAGCCATGGGAGAGTAGATTGATGGAACAAACTCATCATCATGCTGATGCCGCAGAGCAAACTCCTCCACCAAAGAAATGCGTGGACTCCTCAAATTCAAAAAATATTTCAGAACCGTGCAATGTCAAAGTCAGAAAGAACAATGTCAGCACAAGGGTTTCAGCTATACCTCCCCATATTGGCCAAGCCACTCGTTCATCCTCAAGTCCTAGTTCAGAGTTTCACTATGATGAGAGCTCTAATTCATCTTCAATATGCACATCCATGACACCAATATCTGGGAGTGTTTCATTGCATTGTGAGAGGACAGAGGATAGTAACAACAGTACTACTAGGCCAAGTTACATGAACCTGACAGAGTCAACCAAGGCAAAGCAGAAAACCAGCAGTCATCAAAGCAATAGATCCCAGAGGCAACAGTCCATGGATGAGTTCCAGTTTCTGAAAAGAACAGCGGTTTTCTCAAATGGAGATTCCAAAAGCACTGGTGCTTCTGACCCTTCAACCAACTTTTGTAGGCCACTTTACCTACCCACCTACATGGATAAGAAGCCACGGTGA 1278 0.4797 MGASGKWVKALIGLNTKNELGGKKKKWRLWKSSSAGENRSQDFDYGSVASDSFTAAVATVVRAPPKHFKLLKKEWAATRIQTAFRAFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQNMLNERRTKAELYKEAEDGWCDIKGSLEDVKTKLQMRQEGAFKRERAIAYSLAHKQWRSTPFSNSRANTSLKKQEIDKANWGWSWLERWMAAKPWESRLMEQTHHHADAAEQTPPPKKCVDSSNSKNISEPCNVKVRKNNVSTRVSAIPPHIGQATRSSSSPSSEFHYDESSNSSSICTSMTPISGSVSLHCERTEDSNNSTTRPSYMNLTESTKAKQKTSSHQSNRSQRQQSMDEFQFLKRTAVFSNGDSKSTGASDPSTNFCRPLYLPTYMDKKPR 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00436 425 Pfam IQ calmodulin-binding motif 97 114 IPR000048 GO:0005515
Phco2g00436 425 Pfam IQ calmodulin-binding motif 75 94 IPR000048 GO:0005515
Phco2g00436 425 MobiDBLite consensus disorder prediction 264 279 - -
Phco2g00436 425 ProSiteProfiles IQ motif profile. 73 101 IPR000048 GO:0005515
Phco2g00436 425 MobiDBLite consensus disorder prediction 291 425 - -
Phco2g00436 425 SMART iq_5 95 116 IPR000048 GO:0005515
Phco2g00436 425 SMART iq_5 72 94 IPR000048 GO:0005515
Phco2g00436 425 ProSiteProfiles IQ motif profile. 97 124 IPR000048 GO:0005515
Phco2g00436 425 MobiDBLite consensus disorder prediction 291 408 - -
Phco2g00436 425 PANTHER IQ-DOMAIN 5-RELATED 1 387 - -
Phco2g00436 425 Pfam Protein of unknown function (DUF4005) 316 401 IPR025064 -
Phco2g00436 425 MobiDBLite consensus disorder prediction 249 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00436 Phco-Chr2 3803140 3805506 Dispersed/Transposed