Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00422 ATGAGGGGTCTGCAGCAAAGGGACAAAATAAGAGGTAGATTTGTGAAACGTGAGGGCAGTTGTTGGTTGAAATTTGGCGATATTCATTTCGACCTTGACTTCCACAAAAGGGTCACATTTCTGTATTCAATTTCAAGTCATCTTATGTGTGAAATGGGAAAGTGCGAAACCAAAACCCTTCCTAAGACCCTGCCACCGTCGCTCACGCCGTCCGCCGCCGTGCTCTTGGTCGCCAGCGACACCGCGCGATTTCAGGGTAGGGGAGAGAGTAGCAAAGGAGAACGGAAATTGGGTGAGGAATTGGTTAGGCATTTGCCTTGGGGACAGAGTTCGCCTCTTCTAACTCTATTTGTTGTCTTCTTTTCTGCATTGCCATTTTCTGTTTTTCCTGGTTGCTCACGCTTAGATATATGTAGCATCTCCTCTTTGTTCCATCTTCTTGGTCCCATAATTTCAAGTCCAATTGACTGTGCTATGCTAAAGAGCAAGATGTCAGCTGGGCCTGGACTTGAGTCTCTTGTAGATCAGACAATTTCAGTCATTACAAATGATGGACGGAATATAGTGGGAGTCCTGAAAGGTTTTGACCAGGCCACAAATATAATTCTTGATGAGTCCCATGAACGAGTTTATTCTACAAAGGAAGGTGTACAACAACTTGTTCTTGGTTTATACATCATCAGGGGTGACAACATAAGTGTTGTTGGTGAACTAGATGAAGATCTGGATTCTAGTCTGGATTTATCAAAACTTAGAGCTCATCCCTTGAAACCTGTCATACATTGA 786 0.4377 MRGLQQRDKIRGRFVKREGSCWLKFGDIHFDLDFHKRVTFLYSISSHLMCEMGKCETKTLPKTLPPSLTPSAAVLLVASDTARFQGRGESSKGERKLGEELVRHLPWGQSSPLLTLFVVFFSALPFSVFPGCSRLDICSISSLFHLLGPIISSPIDCAMLKSKMSAGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISVVGELDEDLDSSLDLSKLRAHPLKPVIH 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00422 261 ProSiteProfiles Sm domain profile. 165 241 IPR047575 GO:0003723
Phco2g00422 261 CDD LSm8 168 257 IPR034103 GO:0000398|GO:0005688|GO:0046540
Phco2g00422 261 Gene3D - 169 260 - -
Phco2g00422 261 Pfam LSM domain 170 236 IPR001163 -
Phco2g00422 261 FunFam U6 snRNA-associated Sm-like protein LSm8 169 260 - -
Phco2g00422 261 PANTHER LSM1 169 259 IPR044642 -
Phco2g00422 261 SMART Sm3 168 237 IPR001163 -
Phco2g00422 261 SUPERFAMILY Sm-like ribonucleoproteins 168 244 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00422 Phco-Chr2 3654512 3661009 Dispersed/Transposed