Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00411 ATGAAGCACCTGCTCAGAAAGCTTCACATCGGTGGTGGCGCTGCCACCATCAATCACAATCACAACGCATTGTCCTCGCATGAGCATCACGCTCCCTCCACTTCCGCGCTCTCTTCGCCCACCGTCGTTTCGGATCCGACGCCGACTCCGAGCCCCGTCGTGGAGGCGCAGAACGACGTCGTCGAATTCAACTTGTTGCAGGAGGAGGAGTTTCAGATGCAACTAGCGCTCGCAATCAGCGCCTCCGATTCCGATCGCCGCGACACCGCGGAATCGGCGCAGATCGACGCCGCAAAACAGATCAGCCTCGGTTACTCTGCTTCATTCACTGACACTCAAGCCCTAGTTCAGTTCCAATCGCTTCGTTATTGGAACTACAATGTGATTGGTTATGATGAAAAAGTGATGGATGGGTTTTATGATGTATTTGGGGTTACCTCAAATTTGGTTGATCGAGGGAAGATGCCATTGTTGGTGGATCTGCAGACGGCTCCTGTCTCTAGAGATGTTGATTGTGAGGTGATTTTGGTGAACCATGTGGTAGATCTTGAGCTCAATCAGCTTGAGAGGAAGGCGTGTAGTTTGGTTGAGGAGTGTTGTGTTTCTGAACTGGGACTGATTTTGAGTGGCTTGCTTCAGAAGCTCGCAGATGTTGTTGTTAATAGAATGGGTGGACCTGTTATTAATGCTGAGAAACTTACTAAGAGGTGGGCTATGAGGAGTCGTGAGTTGCGGGATTCTATGCAGACCATTGTTCTTCCCCTTGGCTGTCTAGATGTTGGACTTTCACGTCACCGAGCCCTGCTTTTTAAGGTACTTGCTGATAGGATTAACATTCCCTGCATGCTTGTTAAAGGGAGCTATTACACAGGAACTGATGATGGGGCTGTGAATTTGATTAAAGCTGACGATGGAAGTGAATACATAATTGATATGATGGGTGCCCCTGGAACTCTTATTCCTGCCGAGGTACCCAGCAGCCAGCTCGAAAGCAACAGTTTTGCTGTTAGGGGTTGTGCAGAGCTTGTTGGACTACCAGACAAGACAAGTTCAATGGTAGATGATAGAACTGGTGTGCGAGGAGTCTTTTCTGATTGTGATAGAGTTTCAACAGTGGGGAGGGTCCAGACAGAAGAATTATTAGTCATGGGCAGTCAAACAAAGCCCGATGAAATTAATCATGTTAAAGTTAATGAGTCAAGGAGATTTGAACATACAGAAGCATATGAATGCTCTTCACAATCAAAACCATCACCTGCTGAGAATATGCATGTAAAAAATGTCTCGAAGTATGTTCTCAGTGCAGCAAAGGACCCAGAATTTGCCCAAAAACTACATAATGTTCTACTAGAGAGTGGTGCCTTACCTCCTCCTGATCTTTTTTCAGATATAAATCCCCAAGATAGGGGTGTAGATAAAGTAAATGAAAAAAATGTTGATTCTGTTCAAGCTGACACAAATAAGTTATTATTATTAAGGTATGAAAAGTCTCTCATACCCTCAAATGGGTTGGGCTCTGCCAGTGATACTAGGTTATGTCAATCAGCTGACTGGTTAGCTGAGCAACAAAAGGAATTGCAAACAGATGTTGAATTTTACAATTCATCACAGAGTGATAATACAAGGAATGGATTTTTAAATGTTTCTGATAGAGATATTGACGTAGAGAAATCTAATGCAATGAATGTTGTTTTGGCTTCTATTCACTCACATAATAAGGTAGTTAAAGAAAAGTGTACCGGATCTTCCTTGCCCAAGGCAACTCTTTCCTGTAAAATGCATAATGGGATTGGCTGTTTCTGTGAAGATGATGAAAATGGTTATAGAAAGAATGTTGGAGCTTCTTTTAATAATAGCGGGTTGTGCAAAGATTCAGCTGTTCAAAGAAATGAGATGGAGGTTAATGGAGACTGTTATGATGGTAGAAACAAGGAAGTTAACCCAGTGCTTGGTGAAGGCTCAGAATGGGAAATTCAATGGGAGGATCTTGATATTGGTGAGCGTATTGGTATTGGTTCGTATGGCGAAGTTTATCGTGCCGATTGCAATGGCACTGAAGTTGCTGTAAAGAAGTTTCTGGACCAAGATTTCTCTGGTGATGCACTAGCTCAGTTCAAATCTGAAGTTGAGATCATGCTAAGGCTGCGACATCCAAATGTTGTGCTCTTCATGGGAGCAATTACTCGGCCCCCGCAATTCTCTATCTTGACAGAATTTCTTCCAAGAGGCAGTTTATATAGGCTATTGCATCGTCCCAATCTTCGGCTTGATGAGAAGAAACGGTTGCGCATGGCTCTAGATGTGGCTAAGGGAATGAATTACTTGCACACCAGCCATCCTCCCATTGTACACCGAGATTTGAAGTCTCCAAATCTTCTTGTTGACAGGCATTGGATTGTTAAGGTTTGTGATTTTGGTCTGTCAAGAATGAAGCACCATACATTTTTGTCATCAAAGTCTTGTGCTGGAACGCCTGAGTGGATGGCACCAGAAGTCTTGAGAAATGAGCCAGCCAATGAGAAGTGTGATGTGTATAGTTTTGGTGTGATCTTGTGGGAGTTGATCACTACAAGAATTCCCTGGAAAGGTTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGATTCCAAAACAAACGGCTTGAAATTCCAGAAGATGTCAATCCAGCAGTAGCACAGATTATACGTGATTGCTGGCAAACGGAGCCACACTTGCGGCCATCTTTCTCACAGCTGATGTCTCGTCTTTACCGTCTTCAACATATGGTTGTCCCACCAACGAGTTCAACACATTAA 2793 0.4393 MKHLLRKLHIGGGAATINHNHNALSSHEHHAPSTSALSSPTVVSDPTPTPSPVVEAQNDVVEFNLLQEEEFQMQLALAISASDSDRRDTAESAQIDAAKQISLGYSASFTDTQALVQFQSLRYWNYNVIGYDEKVMDGFYDVFGVTSNLVDRGKMPLLVDLQTAPVSRDVDCEVILVNHVVDLELNQLERKACSLVEECCVSELGLILSGLLQKLADVVVNRMGGPVINAEKLTKRWAMRSRELRDSMQTIVLPLGCLDVGLSRHRALLFKVLADRINIPCMLVKGSYYTGTDDGAVNLIKADDGSEYIIDMMGAPGTLIPAEVPSSQLESNSFAVRGCAELVGLPDKTSSMVDDRTGVRGVFSDCDRVSTVGRVQTEELLVMGSQTKPDEINHVKVNESRRFEHTEAYECSSQSKPSPAENMHVKNVSKYVLSAAKDPEFAQKLHNVLLESGALPPPDLFSDINPQDRGVDKVNEKNVDSVQADTNKLLLLRYEKSLIPSNGLGSASDTRLCQSADWLAEQQKELQTDVEFYNSSQSDNTRNGFLNVSDRDIDVEKSNAMNVVLASIHSHNKVVKEKCTGSSLPKATLSCKMHNGIGCFCEDDENGYRKNVGASFNNSGLCKDSAVQRNEMEVNGDCYDGRNKEVNPVLGEGSEWEIQWEDLDIGERIGIGSYGEVYRADCNGTEVAVKKFLDQDFSGDALAQFKSEVEIMLRLRHPNVVLFMGAITRPPQFSILTEFLPRGSLYRLLHRPNLRLDEKKRLRMALDVAKGMNYLHTSHPPIVHRDLKSPNLLVDRHWIVKVCDFGLSRMKHHTFLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELITTRIPWKGLNPMQVVGAVGFQNKRLEIPEDVNPAVAQIIRDCWQTEPHLRPSFSQLMSRLYRLQHMVVPPTSSTH 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00411 930 CDD STKc_MAP3K-like 669 915 - -
Phco2g00411 930 Pfam Protein tyrosine and serine/threonine kinase 664 915 IPR001245 GO:0004672|GO:0006468
Phco2g00411 930 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 138 918 - -
Phco2g00411 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Phco2g00411 930 ProSiteProfiles Protein kinase domain profile. 663 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00411 930 Gene3D Transferase(Phosphotransferase) domain 1 742 925 - -
Phco2g00411 930 SMART serkin_6 663 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00411 930 PRINTS Tyrosine kinase catalytic domain signature 737 750 IPR001245 GO:0004672|GO:0006468
Phco2g00411 930 PRINTS Tyrosine kinase catalytic domain signature 886 908 IPR001245 GO:0004672|GO:0006468
Phco2g00411 930 PRINTS Tyrosine kinase catalytic domain signature 842 864 IPR001245 GO:0004672|GO:0006468
Phco2g00411 930 PRINTS Tyrosine kinase catalytic domain signature 823 833 IPR001245 GO:0004672|GO:0006468
Phco2g00411 930 PRINTS Tyrosine kinase catalytic domain signature 776 794 IPR001245 GO:0004672|GO:0006468
Phco2g00411 930 Pfam Ethylene-responsive protein kinase Le-CTR1 117 320 - -
Phco2g00411 930 SUPERFAMILY Protein kinase-like (PK-like) 654 925 IPR011009 -
Phco2g00411 930 ProSitePatterns Protein kinases ATP-binding region signature. 669 691 IPR017441 GO:0005524
Phco2g00411 930 MobiDBLite consensus disorder prediction 24 52 - -
Phco2g00411 930 FunFam Serine/threonine-protein kinase CTR1 742 925 - -
Phco2g00411 930 Gene3D Phosphorylase Kinase; domain 1 656 740 - -
Phco2g00411 930 FunFam Serine/threonine-protein kinase isoform 1 654 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00411 Phco-Chr2 3564154 3574720 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phco2g00411 PK_Tyr_Ser-Thr 2.8e-65 CL0016