Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00268 ATGTCACCCCACGATAAATCAAGACGCCACGCCTATGCCACTTCTGCAATATCAAATGTCTCTCGACACTCTAGTATATGTGAACAATATCTCGATGCTCGACTGTTGGGAGCTCGAGTCTGGGGGGCTTGTGTACTGTACAGAGCTCGACACTCTAGTATATGTGAACTCGGCGCAGGGGCATGGAGTGTGGAAGAAGATAGGGTTCTCACTGGGGTTGTGGAGGTCCATGGGCCAAGAAACTGGGCATTGATAAGTCGACACGTAAAGGGTCGATCTGGGAAGTCGTGCAGGTTTCGGTGGTGCAACCAGTTGAGTCCCAGGGTGGAATATCCACCCTTCACCACGTGTGAGAATGCGGTTATCCGTGCACGATCGATTAGGAAACAAGTGGGCCACCATTACGAGAATGCTTCCGGGTCGGATCGATAA 432 0.5139 MSPHDKSRRHAYATSAISNVSRHSSICEQYLDARLLGARVWGACVLYRARHSSICELGAGAWSVEEDRVLTGVVEVHGPRNWALISRHVKGRSGKSCRFRWCNQLSPRVEYPPFTTCENAVIRARSIRKQVGHHYENASGSDR 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00268 143 SMART sant 58 107 IPR001005 -
Phco2g00268 143 Pfam Myb-like DNA-binding domain 60 105 IPR001005 -
Phco2g00268 143 Gene3D - 60 110 - -
Phco2g00268 143 CDD SANT 61 103 IPR001005 -
Phco2g00268 143 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 109 IPR017930 -
Phco2g00268 143 PANTHER MYB PROTEIN-RELATED 60 122 - -
Phco2g00268 143 FunFam MYB transcription factor 59 110 - -
Phco2g00268 143 SUPERFAMILY Homeodomain-like 61 118 IPR009057 -
Phco2g00268 143 ProSiteProfiles Myb-like domain profile. 60 105 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00268 Phco-Chr2 2103683 2108098 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco2g00268 Myb_DNA-binding 1.2e-13 CL0123