Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00261 ATGCGTGAAAATCACGCAAAATTCCAAGAACCTGAATCTCTTCTTTCAGTTCTTTCTATTCTATTCCATTCCATATGCATATGGATCTCCGCCGACAATAGTTTCTATTTTTTTTCTCTGTCAAAGTCAAAATCAGATGCTTGCTACAGCTTCGAATGCATTTTGGCAAGTACTAGTTCATTTCATTGCGCACTCACACCAACAACACCAGCTACAGCACCGGCACTACCATCCACCATAACCGTTGACGCGTGCGTGCATATTCTTCCTTGCTCCGCACGTCACATCGCGTTCTCGCCGATTCGCTCGAGCGCGGCTTCGCAGATCTCGTCATCGCCGATCCGAATGGACGGTTACGACGGAACCGTGAGGCTCGGCGCCATTAACCTCAGGCACGATCGCGCCGATTTCGACTCCGGTCCCGACGTTTCCGTCTCCTCGCCGGTCACGCGGCAGAAAGCCGCCGCCGCCAAGCAGTTTATCGAGAATCATTATAAGAACTATCTCCAAGGATTGCAGGATCGCAAAGACAGACGCAGGGCACTGCAGAGGAAAGTGCAAGAATCTCAGATACCGGTTGAGGAGAAGGAGGAAATGATGAGGAACTTGGAGCGCCGAGAAACTGAGTACATGAGGATTCAGAGACGTAAAATTGGAATTGACGACTTCGAACAATTGACGGTGATTGGGAAAGGTGCTTTTGGTGAGGTGAGGCTATGTCGTGCTAAAAGTACGGGGGAGATTTTTGCCATGAAGAAATTGAAGAAGTCAGAGATGCTTAGTCGCGGACAGGTTGAACATGTTCGATCTGAGAGAAACTTGCTGGCAGAGGTTGATAGCAGATGCATAGTAAAACTCCATTATTCATTCCAAGATTCGGATTTCCTTTATCTCATCATGGAATATTTACCTGGTGGTGACATCATGACATTGTTAATGAGAGAAGATATTCTTTCTGAAGAAGTTGCTCGCTTCTACATCGCCGAAAGCATTCTTGCTATTAACTCAATACATCAACACAACTATGTACATAGGGATATTAAACCAGATAACCTGATACTGGACAAAAATGGTCATTTGAAGCTTTCAGACTTTGGCTTATGTAAGCCTCTTGATGATAAGTATTCAACAATTTTATTGGAAAATGAAGATCTTACCGGTCAAGAATCAACTAGTGAAACTGAAGCATATTCTGTCTCGCCTTGGTTGATGCCTAAGGAGAAATTACAGCAGTGGAAACGTAACCGACGTGCATTGGCATACTCAACCGTTGGAACTCTTGATTATATGGCACCTGAAGTTTTGCTCAAGAAGGGCTATGGAATAGAATGCGATTGGTGGTCTCTTGGGGCAATCATGTATGAGATGCTTATTGGGTATCCTCCATTTTGTTCTGACGATCCAAGGATGGCCTGCCGTAAGATTGTTAACTGGAAAACATGCCTGAAATTCCCAGAAGAGCCCAAGATATCAGTTGAAGCAAAGGATTTGATCTGTCGCTTACTATGTGATGTTGATTCAAGACTAGGAACCAGAGGAGTAGAAGAAATAAAGGCTCATCCATGGTTCAAGGGTGTTCAGTGGGACATGCTTTATGAATTAGAAGCCGCTTATAAACCTACAGTAACTGGGGATTTAGATACTCAAAATTTTGAGAAGTTTCCCGAAGTAGATGGCCCACCATCTGTAACAGCAACTGTTGGACCATGGCGGAAGATGCTGACATCCAAAGACAACAATTTCATTGGATATACTTTTAAGAAGTCAGACATACTTAAATCACTTGAAAGTTCAGATGTAGATATCAGAGAAAATGGATCATCAAAAGCCCCTTCATTGATTACTTTGTTAGGTCAGATTGATTTGCAAGATACTGTCATACCAGAATCTGACCAGAAGCCAGAAGCTTGA 1911 0.4364 MRENHAKFQEPESLLSVLSILFHSICIWISADNSFYFFSLSKSKSDACYSFECILASTSSFHCALTPTTPATAPALPSTITVDACVHILPCSARHIAFSPIRSSAASQISSSPIRMDGYDGTVRLGAINLRHDRADFDSGPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKDRRRALQRKVQESQIPVEEKEEMMRNLERRETEYMRIQRRKIGIDDFEQLTVIGKGAFGEVRLCRAKSTGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLHYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEEVARFYIAESILAINSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSTILLENEDLTGQESTSETEAYSVSPWLMPKEKLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGIECDWWSLGAIMYEMLIGYPPFCSDDPRMACRKIVNWKTCLKFPEEPKISVEAKDLICRLLCDVDSRLGTRGVEEIKAHPWFKGVQWDMLYELEAAYKPTVTGDLDTQNFEKFPEVDGPPSVTATVGPWRKMLTSKDNNFIGYTFKKSDILKSLESSDVDIRENGSSKAPSLITLLGQIDLQDTVIPESDQKPEA 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00261 636 CDD MobB_NDR_LATS-like 157 218 - -
Phco2g00261 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 342 354 IPR008271 GO:0004672|GO:0006468
Phco2g00261 636 SMART serkin_6 223 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00261 636 CDD STKc_NDR_like 221 587 - -
Phco2g00261 636 Gene3D Transferase(Phosphotransferase) domain 1 307 374 - -
Phco2g00261 636 Pfam Protein kinase C terminal domain 542 586 IPR017892 GO:0004674|GO:0005524|GO:0006468
Phco2g00261 636 SUPERFAMILY Protein kinase-like (PK-like) 200 575 IPR011009 -
Phco2g00261 636 ProSiteProfiles AGC-kinase C-terminal domain profile. 524 596 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phco2g00261 636 Pfam Protein kinase domain 223 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00261 636 ProSiteProfiles Protein kinase domain profile. 223 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00261 636 PANTHER SERINE/THREONINE-PROTEIN KINASE 144 572 - -
Phco2g00261 636 Gene3D Transferase(Phosphotransferase) domain 1 422 541 - -
Phco2g00261 636 Gene3D Phosphorylase Kinase; domain 1 192 306 - -
Phco2g00261 636 Coils Coil 193 216 - -
Phco2g00261 636 FunFam Non-specific serine/threonine protein kinase 194 306 - -
Phco2g00261 636 SMART pkinase_C_6 524 588 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phco2g00261 636 Gene3D Phosphorylase Kinase; domain 1 542 552 - -
Phco2g00261 636 FunFam Non-specific serine/threonine protein kinase 422 541 - -
Phco2g00261 636 FunFam Non-specific serine/threonine protein kinase 307 374 - -
Phco2g00261 636 ProSitePatterns Protein kinases ATP-binding region signature. 229 252 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00261 Phco-Chr2 2030247 2038024 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Phco2g00261 Pkinase 1.2e-64 CL0016