Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00224 ATGTCTCTTTCTCCAAAATCGCTTTCCACCGGACCCCATCAACATGCTCCGCCGCGCCGCTTGACCAGGCAGAGGAAGCTCCGCCACCTCACCGACCATGACATTGGTTTCTTCTTCTTCCACTCCGCCGACTCTTCTTCGTCTTTTTCTGTCTCGCCGGAGCCCCGCTCCCTCTCCTACCTGCCGCAACCCCTGCCTCTTCCCGAAACGCCGTTGACCCGTCGGGCCTGGTCAGTCGCCCCCGGTTCCTCACATCCTCCCCTCTCTCCTCCATTAGAACATCGTAGTTTTTCTTCTTCCGGGAAGACATTGCCACATGATGTAGTGACACGTACAAAACCTACACTCCATTTGGATTCTACTCTTGCAAATGCAAAATACAATCCGAGAGAGCATATTCCTGCAGCAAGTTTCTTGACAGGCCATAGTTCATGGAAAAACCAAAGAGCAGTGTCTCATGGTAATGACTCGGAAGGTAATCCCCACTTGAATTTGGGTGTTGCTGCCAAGCCCAAGAGTGCTCCAACAAGTGTGGTCACTAGTCCTGATACTAGTCCATATAGATCAAATAATATAGATTTCTTTGATCCTACCTTCAACTTCTCTTTGGAAGTTAATGACAAATCGAGAATGTTATCAGCTAAAAGTGTACACAGTTCAGACCATTCCCCTATTCAGTGCCCACTAAGCCTCACTCGTTACTTCAATCCTAAAATTGAGGAGAGATCTCAGAGCACTAAGTTCTTGTCCAAGGTGAGCCCTGAAAATAACCATGTTGATGCACATCCCTTGCCTCTTCCTCCTGTAGCTTCATCGCCTGCACAATTAACTGTGCTGCATCAATCAAGTACCATCCATCACGCTACTGAAAATATACCTTCCCTCAAAGGTCAATGGCAGAAAGGAAAACTTATTGGACGAGGAACCTTTGGAAGTGTTTTTCATGCAACCAACCTAGAAACTGGAGCCTCTTGTGCTATGAAAGAGGTCAGTTTAATTCCTGATGATCCTACGTCTGCTGAGTGCATGAAACAACTTGACCAGGAAATTAAAATTCTTCACCAACTAAACCACCCCAACATTGTGCGGTATTATGGAAGTGAAATAGTTGGCAATCATTTGTACATATATATGGAGTATGTCCATCCAGGATCAATCAGTAAATATATGCGTGAGCATTGTGGAGCTATGACAGAATCTGTGGTTCGCAATTTTACAAGGCATATTCTCTCTGGATTAGCTTACTTACACAGTAACAAAACCATCCACAGAGATATCAAAGGTGCAAACTTGCTGGTCAATGAATCGGGCATTGTGAAACTTGCAGATTTTGGGCTGTCAAAAATTCTGATGGGGAATTCACATGATCTTTCTTTAAAGGGTAGTCCTTGCTGGATGGCTCCAGAGGTCGTGAAAGGTACCATAAAGAACGAATTTAATCCTGATATTGTCATGGGAATTGACATATGGAGCTTAGGGTGCACCATTATAGAGATGTTAACAGGCAAACCTCCTTGGAGTGAAGCTGAAGGGCCTTCAGCCATGTTCAAGGTGCTGAAAGAGTCCCCGCCCATACCTGAAACTTTATCATCAGTGGGAAAGGATTTCCTCCAAAAATGTTTCCGAAGGGACCCTGCAGATCGACCATCTTCATCAACGCTTCTTAAGCATGCCTTTGTGCAGAACTTGCATGATCAAGATGTTTTAGTCCATCCACAATCCTATCCTAGAGGAGACCTTGGACCAGGACATACTTCCGAACAAAGCAATGCCAAGAACTCTAATCATATTATACCTTGTAGTGACTCTCATTTACCAGAAGTGACCATTCTTCAATCTTCATTGAAACCTGATACCCTCAATTACATGTCTGCTGAAAATTCCAGAAACATTTCCACCATGATGAGAACGATCACAAACTTCTGA 1926 0.445 MSLSPKSLSTGPHQHAPPRRLTRQRKLRHLTDHDIGFFFFHSADSSSSFSVSPEPRSLSYLPQPLPLPETPLTRRAWSVAPGSSHPPLSPPLEHRSFSSSGKTLPHDVVTRTKPTLHLDSTLANAKYNPREHIPAASFLTGHSSWKNQRAVSHGNDSEGNPHLNLGVAAKPKSAPTSVVTSPDTSPYRSNNIDFFDPTFNFSLEVNDKSRMLSAKSVHSSDHSPIQCPLSLTRYFNPKIEERSQSTKFLSKVSPENNHVDAHPLPLPPVASSPAQLTVLHQSSTIHHATENIPSLKGQWQKGKLIGRGTFGSVFHATNLETGASCAMKEVSLIPDDPTSAECMKQLDQEIKILHQLNHPNIVRYYGSEIVGNHLYIYMEYVHPGSISKYMREHCGAMTESVVRNFTRHILSGLAYLHSNKTIHRDIKGANLLVNESGIVKLADFGLSKILMGNSHDLSLKGSPCWMAPEVVKGTIKNEFNPDIVMGIDIWSLGCTIIEMLTGKPPWSEAEGPSAMFKVLKESPPIPETLSSVGKDFLQKCFRRDPADRPSSSTLLKHAFVQNLHDQDVLVHPQSYPRGDLGPGHTSEQSNAKNSNHIIPCSDSHLPEVTILQSSLKPDTLNYMSAENSRNISTMMRTITNF 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00224 641 Pfam Protein kinase domain 300 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00224 641 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 100 572 - -
Phco2g00224 641 ProSitePatterns Protein kinases ATP-binding region signature. 305 328 IPR017441 GO:0005524
Phco2g00224 641 SMART serkin_6 299 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00224 641 FunFam Mitogen-activated protein kinase kinase kinase 5 296 597 - -
Phco2g00224 641 MobiDBLite consensus disorder prediction 583 599 - -
Phco2g00224 641 MobiDBLite consensus disorder prediction 572 599 - -
Phco2g00224 641 Gene3D Transferase(Phosphotransferase) domain 1 289 624 - -
Phco2g00224 641 ProSiteProfiles Protein kinase domain profile. 299 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00224 641 MobiDBLite consensus disorder prediction 1 22 - -
Phco2g00224 641 SUPERFAMILY Protein kinase-like (PK-like) 280 597 IPR011009 -
Phco2g00224 641 MobiDBLite consensus disorder prediction 77 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00224 Phco-Chr2 1742120 1746860 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco2g00224 Pkinase 9.7e-66 CL0016