Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00202 ATGAATCATGTTGCATTTCTCTTCACAATAACCTTTTTTGTTCTTTGTTTTAATAGCAAAGCACAGCAAAATTACTCTGGGAATTCAATATTCAGCTGCAAGAATGATGACAAAATGGGGCCCTCACCTTCATTCCTTTATACCTGCAATGGCCTCAGCAAATCCTGCATGGCCTTCCTAATCTTCAAATCCAGACCCCCTTTTAATTCCATACTCACAATTGCCAACCTCACATCATCAAACCCAGAAGAGCTTGCAAGAATCAATGATGTCTCTGTGCTCACGGTGTTCCCAACTGGGAAAGAAATGATTGTCCCTCTGAACTGTTCTTGTTTAACTAGGGACTATTACCAAGCTGAAACTGAATATGTATTGAGACCATCTCCAACATATTTCACAGTGGCAAATAATACTTTTCAGGGTTTGACCACTTGTGATTCGCTTATGCGTGCTAATTCATATGGGGAACTTGATTTGCTTCCTGGCATGGAGTTGCACGTGCCACTCAGATGTGCTTGTCCAACAATGCATCAGGTCACAAACGGCACCAAGTATTTACTTACATACTCAGTGAACTGGGGTGATAACATTACAAATATTGCTACAAGATTCAATGTAGCAGCAGGTAGTGTGGTTGATGCCAATGGTTTTAACACACCAACACAATCTCTTTTTCCCTTCACAACTGTTCTGATTCCTTTGCCAAGTGAACCTCTGAGTTCAATGACCACAGTTGTTAGTGATCCACCAAATATGTCACCTCCTCTTGTTTGCAGCTCCATTAAGTGCAAGTCAAGGAGAAAATTCCACACTGCTATTGCCACCACTGGGGGTTCTATGGTGCTTCTGTGTGCTGTCCTTTATGGGGTTTTTCTGTTCAGAAAGAGATCTGCAAGGTTCGTTAAGAGAGGTGAAGAAGGTGAGAAAGCAAAGAAGTTATCTTCAGAAAATATCCGTGGTAAGATAGCTATCTTCGAGCATCACTCCAAAGTTTACGAGTTTGAGGAAATAAAGAAGGCCACAGATAATTTTAGTTCAAAGCATAGAATTAAAGGTTCTGTGTTTCGTGGGGTATTTGGTAATGACAAGAACATATTGGCAGTTAAAAAAATGAGAGGAGATGCATCCAAGGAAGTGAATTTGCTGAAAAGGATCAATCATTTCAACCTGATAAAGCTGCAAGGTTATTGTGAAACCGATGCTTGTTCTTATCTTATTTATGAGTATATGGAAAATGGCTCTTTGAGAGAATGGCTAAGCGCAGACAGGACCACCGAGCACCAGATTTTGGCAAAGAGGATTCTGATTGCTCTGGATATTGCCAATGGTCTTCAGTATCTTCACAACTTCACGGAACCTTCCTATGTGCACAGGAACATAAACAGTGGAAACATTCTTCTAAACAAAGATCTAAGAGCCAAGATAGCAAATTTCGCTTTTGCTGAGGAATCAGAAAAGAAAATAACTTCCAGTTGTGCCTTGTCACGTGTGGAGAGGGGTTATATGGCTCCAGAGTATCTGGAGGCAGGGATGGTCACAACCAAAATGGATGTTTATGCCTTCGGAGTGGTGTTGTTGGAATTGGTCACAGGTAAAGATTTTGTTACCAAACAAGAAGAGAGAAAAGCAATGCTTCATGTAGTCATAGTAAACCTCATTGCTAAAGAGAATGAAGAAGAGAAGGTGAGTTTGTTCGTTGATCCTAGTTTCACTGGAAACAATGAGAAAGTGTGTGCTCTCCAGCTAGTTAAATTAGGTCTAGCCTGCTTGGTTGAAGAACCAGAAGAGAGGCCGACCATGGTAGAGGTAGTCTCTAGCTTATTGAAAATATATGTAAGTTATATGGACCAAATAATGCCACTTAGCATCAGCAACAGTCTGAGCATGGAGAGGTGA 1896 0.4088 MNHVAFLFTITFFVLCFNSKAQQNYSGNSIFSCKNDDKMGPSPSFLYTCNGLSKSCMAFLIFKSRPPFNSILTIANLTSSNPEELARINDVSVLTVFPTGKEMIVPLNCSCLTRDYYQAETEYVLRPSPTYFTVANNTFQGLTTCDSLMRANSYGELDLLPGMELHVPLRCACPTMHQVTNGTKYLLTYSVNWGDNITNIATRFNVAAGSVVDANGFNTPTQSLFPFTTVLIPLPSEPLSSMTTVVSDPPNMSPPLVCSSIKCKSRRKFHTAIATTGGSMVLLCAVLYGVFLFRKRSARFVKRGEEGEKAKKLSSENIRGKIAIFEHHSKVYEFEEIKKATDNFSSKHRIKGSVFRGVFGNDKNILAVKKMRGDASKEVNLLKRINHFNLIKLQGYCETDACSYLIYEYMENGSLREWLSADRTTEHQILAKRILIALDIANGLQYLHNFTEPSYVHRNINSGNILLNKDLRAKIANFAFAEESEKKITSSCALSRVERGYMAPEYLEAGMVTTKMDVYAFGVVLLELVTGKDFVTKQEERKAMLHVVIVNLIAKENEEEKVSLFVDPSFTGNNEKVCALQLVKLGLACLVEEPEERPTMVEVVSSLLKIYVSYMDQIMPLSISNSLSMER 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00202 631 Gene3D LysM domain 175 244 IPR036779 -
Phco2g00202 631 Gene3D Phosphorylase Kinase; domain 1 305 409 - -
Phco2g00202 631 ProSiteProfiles Protein kinase domain profile. 295 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00202 631 Gene3D Transferase(Phosphotransferase) domain 1 410 620 - -
Phco2g00202 631 Pfam LysM domain 189 233 IPR018392 -
Phco2g00202 631 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 5 613 - -
Phco2g00202 631 SUPERFAMILY Protein kinase-like (PK-like) 326 607 IPR011009 -
Phco2g00202 631 FunFam PTI1-like tyrosine-protein kinase 3 410 619 - -
Phco2g00202 631 ProSiteProfiles LysM domain profile. 187 232 IPR018392 -
Phco2g00202 631 Pfam Protein tyrosine and serine/threonine kinase 370 607 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00202 Phco-Chr2 1543209 1545104 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phco2g00202 PK_Tyr_Ser-Thr 6.6e-37 CL0016