Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00039 ATGCTCGACTCCGTCCTTCTGGCGCTGTTCTTGCCCTGCCTTGGCATGAGCGCCGTCTTCATCGTCTACATGTGTCTTCTATGGTACGCCACCACACACCGCACCGATCCCCAGCTACCGGCCAAGCCTCTCCCCGACGCCGGCCTCTCCCCTGCACAGCTCCAAAACCTCCCCTCAATCACCGGAAAAGACCTTCTCATGGGCTCCGAATGCGCCGTCTGCCTCGACGACATCGCCACCGACCAACCCGCTCGACTGGTTCCCGGTTGCAACCACGCCTTCCATGTGGAATGCGCAGACACCTGGCTCTCCAAGCACCCTCTCTGCCCTCTCTGCAGAGCCAAACTCGACCCCACGCTTTTCTCTTCCTCAGAAAATCCTTGTTGA 387 0.5995 MLDSVLLALFLPCLGMSAVFIVYMCLLWYATTHRTDPQLPAKPLPDAGLSPAQLQNLPSITGKDLLMGSECAVCLDDIATDQPARLVPGCNHAFHVECADTWLSKHPLCPLCRAKLDPTLFSSSENPC 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00039 128 ProSiteProfiles Zinc finger RING-type profile. 71 113 IPR001841 -
Phco2g00039 128 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 41 119 IPR013083 -
Phco2g00039 128 SUPERFAMILY RING/U-box 62 118 - -
Phco2g00039 128 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 16 124 - -
Phco2g00039 128 Pfam Ring finger domain 70 113 IPR001841 -
Phco2g00039 128 SMART ring_2 71 112 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00039 Phco-Chr2 491266 491652 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00039 2 491266 491652 Phco2g00039 2 491266 491652 ECH
Phco2g00039 2 491266 491652 Phco7g00252 7 1765221 1765610 PCT