Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00038 ATGGGGTTGGGGTTGTTTAAGGCGTCGTTGTGCAGCAGCAAGGCCCGTGAAATAGAAACCATGGAGTCATGGGAGTCCTCTCCGGAGCATAGCTCGGAAGAAGATAGTGGAAAAGGGAAAGCAGTTGCAGGTGGTGGTGAGAAAAAGATGAGCTCGCCAGAGACGGGAGCTATTCTGGGAAAACCGTACGTAAAGATAGAGCAAATTTACGAGATGAAGAAAGAGCTAGGAAGCGGACAATGGGGTGAGACTTATCTGTGCGTGGAGAAGACGACGCAGAGAGAGTACGCATGCAAGTCGATTGCGAAGTCGAAGCTTTTGAGTGAGCAGGAGATTGAGAACGTGAGAAGAGAGGTTATGATTCTTCAGCATCTCTCTGGGCAACCCAACATTGTGGAGTTCAGAGGGGCTTACGAGGACAGACAGCAAGTGCACCTGGTGATGGAGCTGTGCAGTGGTGGCGAACTCTTCGACCGCATCATGGCCAAAGGGCACTACTCCGAGCGTGAGGCGGCAACGGTGGCGAGGCAAATCGTGAACGCCGTTCACGTCTGCCATTTCATGGGCGTCATGCATCGAGACCTCAGGCCAGAGAACTTCTTGTTAGCCACCAACACAGAGGATGCTCCTGTCAAAACCACCGATTTTGGACTCTCCATTTTCATCGAGGAAGGTAAAGTGTATAGGGAGCTTGTTGGAAGTGCGTACTACGTGGCCCCAGAGGTGTTAAAAAGGAGTTATGGAAAAGAAATAGATGTGTGGAGTGCAGGAATCATTTTATACATCCTTCTAAGTGGAGTGCCTCCATTTTGGGCTGAAACCGAGAGAGGCATATTTGATTCAATTTTGGAAGGCAAACTTGATCTGGAGAGCGCACCATGGCCTTCTATTTCAGCTGCTGCAAAGGATTTGATCAGGAAAATGTTGACCCGTGACCCTAAGAAACGCATTACAGCTGCTGAAGCACTTGAACACCCCTGGATGAAGGAGGGTGGCGAAGCATCTGACAAGCCTATAGACAATGCTGTTTTGAGTAGGATTGAACAGTTCACAGCAATAAACAAGATGAAGAAACTTGCTTTAAAGCCACAAAGACGACCACGAAGACAACGAAGAAGACCAACCTTTGACACAACTTATCATAAATGA 1149 0.4848 MGLGLFKASLCSSKAREIETMESWESSPEHSSEEDSGKGKAVAGGGEKKMSSPETGAILGKPYVKIEQIYEMKKELGSGQWGETYLCVEKTTQREYACKSIAKSKLLSEQEIENVRREVMILQHLSGQPNIVEFRGAYEDRQQVHLVMELCSGGELFDRIMAKGHYSEREAATVARQIVNAVHVCHFMGVMHRDLRPENFLLATNTEDAPVKTTDFGLSIFIEEGKVYRELVGSAYYVAPEVLKRSYGKEIDVWSAGIILYILLSGVPPFWAETERGIFDSILEGKLDLESAPWPSISAAAKDLIRKMLTRDPKKRITAAEALEHPWMKEGGEASDKPIDNAVLSRIEQFTAINKMKKLALKPQRRPRRQRRRPTFDTTYHK 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00038 382 MobiDBLite consensus disorder prediction 18 54 - -
Phco2g00038 382 FunFam calcium-dependent protein kinase 1 156 335 - -
Phco2g00038 382 ProSiteProfiles Protein kinase domain profile. 70 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00038 382 MobiDBLite consensus disorder prediction 18 42 - -
Phco2g00038 382 CDD STKc_CAMK 70 327 - -
Phco2g00038 382 SMART tyrkin_6 70 328 IPR020635 GO:0004713|GO:0006468
Phco2g00038 382 SUPERFAMILY Protein kinase-like (PK-like) 70 336 IPR011009 -
Phco2g00038 382 MobiDBLite consensus disorder prediction 358 382 - -
Phco2g00038 382 Gene3D Transferase(Phosphotransferase) domain 1 157 370 - -
Phco2g00038 382 ProSitePatterns Protein kinases ATP-binding region signature. 76 103 IPR017441 GO:0005524
Phco2g00038 382 PANTHER SERINE/THREONINE-PROTEIN KINASE 64 357 - -
Phco2g00038 382 ProSitePatterns Tyrosine protein kinases specific active-site signature. 190 202 IPR008266 GO:0004672|GO:0006468
Phco2g00038 382 FunFam Calcium-dependent protein kinase 1 72 155 - -
Phco2g00038 382 Pfam Protein kinase domain 70 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00038 382 Gene3D Phosphorylase Kinase; domain 1 72 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00038 Phco-Chr2 481162 485276 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phco2g00038 Pkinase 1.6e-75 CL0016