Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00037 ATGGGGTTGGGGTTGTTTAAGGCGTTGTTTTGCTGCAACAAGGCCCGTGAAATAGAAATCATGGAGTCATGGGAGTCCTCTCCGGAGCATAGCTCGAAAGAAGATAGTGGAAAAAGGAAAGCAGTTGCAGGTGTTGGTGAGAAAAAGAAGAGCTCGCCACAGACGGGAGCTATTCTGGGAAAACCGTACGTAAAGATAGAGCAAATTTACGAGATGAAGAAAGAGCTAGGAAGCGGACAATGGGGTGTGACTTATCTGTGCGTGGAGAAGACGACGCAGAGAGAGTACGCATGCAAGTCGATTGCGAAGTCGAAGCTTTTGAGTGAGCAGGAGATTGAGGACGTGAGAAGAGAGGTTATGATTCTTCAGCATCTCTCTGGGCAACCCAACATTGTGGAGTTCAGAGGGGCTTACGAGGACAGAGAGCAGGTGCACCTGGTGATGGAGCTGTGCAGTGGTGGCGAACTCTTCGACCGCATCATTGCCAAAGGGAACTACTCCGAGCGTGAGGCGGCAACCGTCACGAGGCAGATCGTGAACGCCGTTCACGTCTGCCATTTCATGGGCGTCATGCATCGAGACCTCAAGCCAGAGAACTTCTTGTTAGCCACCAACACAGACGATGCTCCCGTCAAAACCACTGATTTTGGACTCTCCATTTTCATCGAGGAAGAAGCTGAAAATCTCACACATCAAGCAGAATCTCTCCACAAACAAACGTTATTTATCCCCATGGGCCACTGCTTCAGCAAACCCCGTAGCAACGAAATAACAATCAACTATGATTCACCACCCCATCATCGTTATGAGCCTCGTCCACGCCCTCGAACAACCCAACAACATCACCAACCTCGTTATCCCTACTCTTATCCAAACTCAGACACTTCTCTTTCCATCGCCCCTTCATCATCATCATTCGGTGATCAGTCACGAATTCTAGAGAAACCATACTTCGACATGAAAGCGCTTTACACGCTGGAGAGGGAACTGGGGAGGGGTCAATTCGGGATCACTCGTCTTTGTATCGAGAAGACCACTGGAAGGAAATACGCCTGCAAGTCTCTTTCAAAGCGGAGGTTAACCAAAACGAAGCAAATTGATGATGTGAAGAGGGAAATTCTGATCCTGCAGCACCTCTCGGGTCAACCCAACATCGTTGAGTTCAAGGGTGCTTACGAGGATTTGCAGAATGTGCATTTGGTGATGGAGCTGTGTTTGGGTGGCGAGCTTTTCGATCGCATCACTGCAAAGGGTAGTTACTCCGAGAGTGAAGCTGCTTCCATATTCAGACAAATCGTGAATGTGGTTCATGCATGTCACTTCATGGGGGTCATGCATAGAGACCTTAAGCCAGAAAATTTCTTGCTTGCTAATAAGGATCCTAAGGCACCGTTGAAAGCCATCGATTTTGGATTGTCCGTCTTCATTGAAGAAGATAAAGTGTATAGGGAGCTTGTTGGAAGTGCGTACTACGTGGCCCCAGAGGTGTTAAAAAAGTGTTATGGAAAAGAAATAGATGTGTGGAGTGCAGGAATCATTTTATACATCCTTCTAAGTGGAGTGCCTCCTTTTTGGGCTGAAACCGAGAAAGGCATATTTGATTCAATTTTGGAAGGCAAACTTGATCTGGAGAACGCACCATGGCCTTCTATTTCAGCTGCTGCAAAGGATTTGATCAGGAAAATGTTGACCCGTGACCCTAAGAAACGGATTACAGCTGCCGAAGCACTTGAACACCCCTGGATGAAGGAGGGTGGTGAAGCATCTGACAAGCCTATAGACAATGCTGTTTTGAGTAGGATGAAACAGTTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTTATAGCAGAAAACCTTTCAGAGGAGGAAATCAAGGGCTTGAAACAAATGTTCAACAACATGGACACTGATCGCAGTGGCACAATCACATACGAGGAACTCAAATCTGGATTAACCAAATTGGGATCCAAGCTTAATGAATACGAAATAAAGCAGCTAATGGAAGCTGCTGATGTTGACAAGAATGGAACTATTGACTATCAAGAGTTCATCACTGCCACTATAAACCGGCATAAACTGGAAAAGGAAGAGAATTTGTATAAGGCTTTTCGATACTTTGACAAGGATAACAGTGGATATATAACAAGAGAAGAGCTTAGACAAGCATTGACTGAATATCAGATGGGAGATGAGGCTACTATAGATGAAGTCATCGATGATGTGGATACTGATAACGATGGGAGAATAAATTACCAGGAGTTTGTGGCAATGATGAGAAAGGGGATTCTGGATATTGATGAGAAGGAGAAACCACGATAG 2328 0.4558 MGLGLFKALFCCNKAREIEIMESWESSPEHSSKEDSGKRKAVAGVGEKKKSSPQTGAILGKPYVKIEQIYEMKKELGSGQWGVTYLCVEKTTQREYACKSIAKSKLLSEQEIEDVRREVMILQHLSGQPNIVEFRGAYEDREQVHLVMELCSGGELFDRIIAKGNYSEREAATVTRQIVNAVHVCHFMGVMHRDLKPENFLLATNTDDAPVKTTDFGLSIFIEEEAENLTHQAESLHKQTLFIPMGHCFSKPRSNEITINYDSPPHHRYEPRPRPRTTQQHHQPRYPYSYPNSDTSLSIAPSSSSFGDQSRILEKPYFDMKALYTLERELGRGQFGITRLCIEKTTGRKYACKSLSKRRLTKTKQIDDVKREILILQHLSGQPNIVEFKGAYEDLQNVHLVMELCLGGELFDRITAKGSYSESEAASIFRQIVNVVHACHFMGVMHRDLKPENFLLANKDPKAPLKAIDFGLSVFIEEDKVYRELVGSAYYVAPEVLKKCYGKEIDVWSAGIILYILLSGVPPFWAETEKGIFDSILEGKLDLENAPWPSISAAAKDLIRKMLTRDPKKRITAAEALEHPWMKEGGEASDKPIDNAVLSRMKQFRAMNKMKKLALKVIAENLSEEEIKGLKQMFNNMDTDRSGTITYEELKSGLTKLGSKLNEYEIKQLMEAADVDKNGTIDYQEFITATINRHKLEKEENLYKAFRYFDKDNSGYITREELRQALTEYQMGDEATIDEVIDDVDTDNDGRINYQEFVAMMRKGILDIDEKEKPR 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00037 775 ProSiteProfiles EF-hand calcium-binding domain profile. 625 660 IPR002048 GO:0005509
Phco2g00037 775 FunFam Calcium-dependent protein kinase 1 590 765 - -
Phco2g00037 775 SMART efh_1 701 729 IPR002048 GO:0005509
Phco2g00037 775 SMART efh_1 736 764 IPR002048 GO:0005509
Phco2g00037 775 SMART efh_1 665 693 IPR002048 GO:0005509
Phco2g00037 775 SMART efh_1 629 657 IPR002048 GO:0005509
Phco2g00037 775 ProSitePatterns Protein kinases ATP-binding region signature. 330 353 IPR017441 GO:0005524
Phco2g00037 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Phco2g00037 775 SUPERFAMILY EF-hand 621 762 IPR011992 -
Phco2g00037 775 ProSitePatterns EF-hand calcium-binding domain. 674 686 IPR018247 -
Phco2g00037 775 MobiDBLite consensus disorder prediction 280 294 - -
Phco2g00037 775 FunFam Calcium-dependent protein kinase 1 72 155 - -
Phco2g00037 775 SMART serkin_6 70 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00037 775 SMART serkin_6 324 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00037 775 ProSitePatterns EF-hand calcium-binding domain. 710 722 IPR018247 -
Phco2g00037 775 ProSiteProfiles Protein kinase domain profile. 70 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00037 775 MobiDBLite consensus disorder prediction 23 46 - -
Phco2g00037 775 MobiDBLite consensus disorder prediction 254 294 - -
Phco2g00037 775 Pfam Protein kinase domain 70 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00037 775 Pfam Protein kinase domain 324 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00037 775 Gene3D Phosphorylase Kinase; domain 1 72 156 - -
Phco2g00037 775 Gene3D Phosphorylase Kinase; domain 1 326 409 - -
Phco2g00037 775 FunFam Calcium-dependent protein kinase 1 326 409 - -
Phco2g00037 775 ProSiteProfiles EF-hand calcium-binding domain profile. 733 767 IPR002048 GO:0005509
Phco2g00037 775 ProSiteProfiles EF-hand calcium-binding domain profile. 697 732 IPR002048 GO:0005509
Phco2g00037 775 MobiDBLite consensus disorder prediction 23 54 - -
Phco2g00037 775 ProSiteProfiles Protein kinase domain profile. 324 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00037 775 ProSitePatterns EF-hand calcium-binding domain. 638 650 IPR018247 -
Phco2g00037 775 FunFam calcium-dependent protein kinase 1 410 589 - -
Phco2g00037 775 PANTHER SERINE/THREONINE-PROTEIN KINASE 317 757 - -
Phco2g00037 775 Gene3D Transferase(Phosphotransferase) domain 1 410 589 - -
Phco2g00037 775 SUPERFAMILY Protein kinase-like (PK-like) 70 226 IPR011009 -
Phco2g00037 775 Pfam EF-hand domain pair 699 762 IPR002048 GO:0005509
Phco2g00037 775 Pfam EF-hand domain pair 630 690 IPR002048 GO:0005509
Phco2g00037 775 SUPERFAMILY Protein kinase-like (PK-like) 324 589 IPR011009 -
Phco2g00037 775 ProSitePatterns EF-hand calcium-binding domain. 745 757 IPR018247 -
Phco2g00037 775 Coils Coil 647 667 - -
Phco2g00037 775 Gene3D - 590 764 - -
Phco2g00037 775 ProSiteProfiles EF-hand calcium-binding domain profile. 661 696 IPR002048 GO:0005509
Phco2g00037 775 CDD STKc_CAMK 324 581 - -
Phco2g00037 775 Gene3D Transferase(Phosphotransferase) domain 1 157 267 - -
Phco2g00037 775 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00037 Phco-Chr2 471689 476210 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phco2g00037 Pkinase 9.2e-74 CL0016