Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00031 ATGTACTGCACCTTGTCATTTCCCTGTGTTCATTTTGTTCCGGTGGGAAGAACTTGTTGCAACTACAGAAGAGTCACTTTAGCAGCACATTCAAAAAGAAGAAGACCACCAAAGGATAACTGGTATCGACCACCAAAGGATAACCGGTATCGACCACATCCTAAGCAACCTCCAGATTTTGGTGTTAATTTGTTCTTGAAGAAGCCTAGCACCACCTCTAAACCAACTGAGGCTGATTTTGATATCAATGAAGAGAATGGTGAAGAGGAGGATGAAAATATTGGTGTTGTTTGGGAATCAGATGAGCTTGAAGCCATCTCATCACTTTTCCAAGGTAGAATTCCGCAAAAGCCTGGAAAATTACATCGAGAAAGGCCTCTTCCTCTCCCAGCTCCCTACAAGCTCCGACCTTTGGGACTACCTAAACCAAAAACACAAGTAAAATTGACAGCTCCAGCTGTGGTTTCTTCTCGGGCTTCTATGGCTAAGAAAGTGTACAAAAGCCCGAGTTTCCTAGTTGGACTGGCAAGAGAAATGAGTAGACTTGGTCCAGCTGAAGATGTATCTAAAGTTCTTGGAAAGTGGGTGCAGTTCCTGAGGAAAGGGTCCCTGTCATTGACAATAAGGGAATTAGGTCATATGGGATTACCTGAGAGAGCTCTGCAAACATTCTTATGGGCACAGAATCAACCTCATCTCTGCCCTGATGATTGGATTCTGGCCTCAACTGTTGAGGTCTTGGCCAGGAATCATGAGTTGAGAATTCCATTCAACATTGACCACTATACTGGTCTGGCAAGTCGTGCTGTATTGGAGGCAATGATCAAGGGTTTTATAAAAGGAGGGAACCTTAGACTTGCGTGGAAGGTTCTAGTAGTTGCCAGAAGGGATAAAAGAATGTTGGATTCTAGCATTTATGCCAAGTTAATATTAGAACTTGGAAAGAACCCTGACAGACACAGGCATGTGTTGCCCTTGTTAGATGAACTTGGGGAACGAGATGAATTGAATTTAAGCCAGCAAGATTGTTCTGCTATAATGAAAGTATGTGTTAAGATGGGAAAATTTGAAGTAGTTGAGAGCCTGTTTAGTTGGTTCAAGCAGTCTAGCTATCAACCAAGCGTAGTTATGTTCACTTCTGTTATTCACAGCCGTTACACAGAGAAGAAATACAGAGAGGCATTGGCTGTCGTTTGGGAGATGGAGTCTTCTAATTGCCTTTTTGACCTTCCTGCTTATCGTGTGGTAATAAAACTGTTTGTTGCTCTGAATGATCTATCTAGGGCCATGAGATATTTTTCAAAACTTAAAGAAGCTGGATTTTCTCCCACTTTTGGCTTATACAAGGACATGCTTCAAATTTACATGGCCTCTGGGAGGACTGCAAAGTGCAAAGAGATCTGCAAGGAGGCTGATATAGCAGGATTCAAGCTAGATAAATATCAAGTTTCACAGATAAATGAAAATTTGTAG 1473 0.4202 MYCTLSFPCVHFVPVGRTCCNYRRVTLAAHSKRRRPPKDNWYRPPKDNRYRPHPKQPPDFGVNLFLKKPSTTSKPTEADFDINEENGEEEDENIGVVWESDELEAISSLFQGRIPQKPGKLHRERPLPLPAPYKLRPLGLPKPKTQVKLTAPAVVSSRASMAKKVYKSPSFLVGLAREMSRLGPAEDVSKVLGKWVQFLRKGSLSLTIRELGHMGLPERALQTFLWAQNQPHLCPDDWILASTVEVLARNHELRIPFNIDHYTGLASRAVLEAMIKGFIKGGNLRLAWKVLVVARRDKRMLDSSIYAKLILELGKNPDRHRHVLPLLDELGERDELNLSQQDCSAIMKVCVKMGKFEVVESLFSWFKQSSYQPSVVMFTSVIHSRYTEKKYREALAVVWEMESSNCLFDLPAYRVVIKLFVALNDLSRAMRYFSKLKEAGFSPTFGLYKDMLQIYMASGRTAKCKEICKEADIAGFKLDKYQVSQINENL 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00031 490 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 409 443 IPR002885 -
Phco2g00031 490 Gene3D Tetratricopeptide repeat domain 330 476 IPR011990 GO:0005515
Phco2g00031 490 Gene3D Tetratricopeptide repeat domain 175 329 IPR011990 GO:0005515
Phco2g00031 490 PANTHER YALI0C12947P 15 487 - -
Phco2g00031 490 Pfam Pentatricopeptide repeat domain 370 420 IPR002885 -
Phco2g00031 490 MobiDBLite consensus disorder prediction 32 54 - -
Phco2g00031 490 MobiDBLite consensus disorder prediction 31 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00031 Phco-Chr2 451903 453375 Dispersed