Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00020 ATGGAGGAGCAGAAGCAGGAGGAAACCGTAAAGCGTTTGGGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACAAATGGGAATCAGAATCAGAATCAGTGCGGGCTTTGCCCTCCGACGCTGTGAAGGAGTTGTTGTCCGAAGGGGTATGCGCCCGTTGCATCTTTCGCCTCTTCGGCCTCCAAGGCCGCGTCTATGCTTCACCTCCTTCCCTCTCTTCTCTCTCCCCCACCACACATCAACTTTGCACACTTTGCTTCGGGATTCTGCAGTTCACGTATTATTCAGACGACACCCAAACCCTCCTTCAAAATCACAACCTCCCACTTCTCATTGCTGACACGGTTAAACGACACGCCTATCAGTTCCATACCTTTTCCCTTGAAGTTTCCATCCCACCAATCATTCTCCATAATGATAACTCTCTTCGCTCATATATGAAAACCAAATTCGGGTCCCAACCTTGGTTCCAAGAAAACTTGCATACTGGATGCATATCTACAAAGGATGCCTTAAAATCTTCTCTAATATATCCTCTTGAAAATCTTCTGGAATGTAAATCGAGTATGGGCTCTTTCCGCATTCGTTTGACTTACACTCACGCAAAAGCATCAAAGGGGGATCAGAAAGGGTCAGATAGTGCCGAGACTTGCAAGAGAAGGAAAATAGGTGAGTCCAATATTGATGGAGAAAGACCTTTTAGCAATTCACTTGAAAATGATTCCTCTGACTGCTGTGAATTCCTGCTAGAAAAGGCAAATGAGCCTTGCCATTTTGCTTTCTTTTGCTACAGAACGCCTTTATATTTTGGTGGAAGATATCTGAAGTATTCACGGAATGTGAGTCAAACATGCTGGATCATTGATGATGAAAGAATGGGAGAAGCATCAGTTGAGGAAATAATTGGTGGAAACATCCTCCAAGCCTGCCAAGGTGATAGTTTTAAGTTTCATGCTGCAGGCAGAGAAGATATCGATGTTCGAATGTTGGGTCCAGGCAGGCCCTTTCTTGTTGAGGTGCAAAATGCACGACATACCCCATCTGAACTGTTCGTAAAAGATGTAGAGAAAAAGATAAATAACATGGAGAATAAATTGGTTAGGGTGAAAAATCTGAAACTTGTGGGTAGTGATGGCTGGGACCTTATGCGTGAAGGTGAAGCAGAGAAGCAGAAACAATATGCTGCTTTAGTGTGGATTTCTCGTCCTCTAAAGGATGAAGATTTTCAATGTATTTCTTCACACAAGGATTTGAAACTTTTGCAGAGGACCCCAATAAGGGTGCTACATCGTCGCAGTCCTTTAGAGCGGGAAAAGATTATTCATTGGATGAAAATAGAGGCAATTGCTGGAAGTTCCCAATATTTTCTTTTGCACCTATGTACTCAGGCTGGGACCTATATCAAGGAATTTGTTCATGGGGATCTTGGACGCACCCATCCTAGCATTGGATCAATTTTGGGATGCAGAGCTGAAATTTTGCAACTTGATGTGACAGACATCAAAATGGAATGTTTCCTGACATAA 1527 0.4316 MEEQKQEETVKRLGEEEEEEEEEEDKWESESESVRALPSDAVKELLSEGVCARCIFRLFGLQGRVYASPPSLSSLSPTTHQLCTLCFGILQFTYYSDDTQTLLQNHNLPLLIADTVKRHAYQFHTFSLEVSIPPIILHNDNSLRSYMKTKFGSQPWFQENLHTGCISTKDALKSSLIYPLENLLECKSSMGSFRIRLTYTHAKASKGDQKGSDSAETCKRRKIGESNIDGERPFSNSLENDSSDCCEFLLEKANEPCHFAFFCYRTPLYFGGRYLKYSRNVSQTCWIIDDERMGEASVEEIIGGNILQACQGDSFKFHAAGREDIDVRMLGPGRPFLVEVQNARHTPSELFVKDVEKKINNMENKLVRVKNLKLVGSDGWDLMREGEAEKQKQYAALVWISRPLKDEDFQCISSHKDLKLLQRTPIRVLHRRSPLEREKIIHWMKIEAIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTDIKMECFLT 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00020 508 PANTHER UNCHARACTERIZED 78 505 IPR039894 -
Phco2g00020 508 FunFam tRNA pseudouridine synthase Pus10 392 502 - -
Phco2g00020 508 NCBIfam tRNA pseudouridine(54/55) synthase Pus10 266 502 - -
Phco2g00020 508 SUPERFAMILY Pseudouridine synthase 388 502 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Phco2g00020 508 Gene3D - 267 391 - -
Phco2g00020 508 Gene3D - 392 502 - -
Phco2g00020 508 MobiDBLite consensus disorder prediction 1 33 - -
Phco2g00020 508 MobiDBLite consensus disorder prediction 13 28 - -
Phco2g00020 508 Coils Coil 3 30 - -
Phco2g00020 508 FunFam tRNA pseudouridine synthase Pus10 267 391 - -
Phco2g00020 508 Coils Coil 352 372 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00020 2 392346 397714 Phco2g00020 2 392346 397714 ECH